RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DNAJB11Q9UBS4 358 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 ANKRD34CP0C6C1 535 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 OR5H8P0DN80 308 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 ABCD3P28288 659 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 BTG2P78543 158 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 OR1E3Q8WZA6 343 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 DNAJB12Q9NXW2 375 aaKnown RBP12.58□□□□□ -0.4
SMC5-201ENST00000361138 PCDHGA9Q9Y5G4 932 aaKnown RBP12.58□□□□□ -0.4
SMC5-201ENST00000361138 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
SMC5-201ENST00000361138 IL2RGP31785 369 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 THNSL2Q86YJ6 484 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 LINC00518Q8N0U6 118 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 PRO1933Q9H354 126 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
SMC5-201ENST00000361138 RAB5AP20339 215 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 ZNF528Q3MIS6 628 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 NCMAPQ5T1S8 102 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 MAP3K3Q99759 626 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 QSER1Q2KHR3 1735 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 PDGFBP01127 241 aaPredicted RBP12.58□□□□□ -0.4
SMC5-201ENST00000361138 NMBP08949 121 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 QDPRP09417 244 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 AWAT1Q58HT5 328 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 GGNBP1Q5YKI7 109 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 FAHD2BQ6P2I3 314 aaPredicted RBP12.58□□□□□ -0.4
SMC5-201ENST00000361138 FAHD2AQ96GK7 314 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 KCNK15Q9H427 330 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 MIOXQ9UGB7 285 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 ACAD8Q9UKU7 415 aa12.58□□□□□ -0.4
SMC5-201ENST00000361138 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 PRRT4C9JH25 899 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 CD1CP29017 333 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 TFAP2EQ6VUC0 442 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 DMBX1Q8NFW5 382 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 CMBLQ96DG6 245 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 ALG14Q96F25 216 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 SHDQ96IW2 340 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 SMIM7Q9BQ49 75 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 ZFP64Q9NPA5 681 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 A0A1B0GTH9 108 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 SSTP61278 116 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 ZNF345Q14585 488 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 RGS7BPQ6MZT1 257 aaPredicted RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 OR4N2Q8NGD1 307 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 KTI12Q96EK9 354 aaPredicted RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 ZNF230Q9UIE0 474 aaPredicted RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 KIAA1217Q5T5P2 1943 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 GPANK1O95872 356 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 THBS3P49746 956 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 RBP2P50120 134 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 PCK2Q16822 640 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 ZNF770Q6IQ21 691 aaPredicted RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 ETFBKMTQ8IXQ9 262 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 PPICP45877 212 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 RTN4IP1Q8WWV3 396 aaPredicted RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 RPUSD4Q96CM3 377 aaKnown RBP12.57□□□□□ -0.4
SMC5-201ENST00000361138 GPA33Q99795 319 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 GHRLQ9UBU3 117 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 KLF15Q9UIH9 416 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 SHANK3Q9BYB0 1731 aa12.57□□□□□ -0.4
SMC5-201ENST00000361138 C20orf202A1L168 122 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 CD160O95971 181 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 OR10J5Q8NHC4 309 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 GLRA1P23415 457 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 OTX2P32243 289 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 DHODHQ02127 395 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 FAM58AQ8N1B3 248 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 ZNF775Q96BV0 537 aaPredicted RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 ZNF764Q96H86 408 aaPredicted RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 DHCR7Q9UBM7 475 aaKnown RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 DOCK5Q9H7D0 1870 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 SERPINE3A8MV23 424 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 OPRM1P35372 400 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 NOVA1P51513 510 aaKnown RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 FAM199XQ6PEV8 388 aaPredicted RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 MITD1Q8WV92 249 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 ZNF816-ZNF321PA0A0X1KG74 233 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 SLC25A4P12235 298 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 SELENOVP59797 346 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 NKAIN2Q5VXU1 208 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 ZNF321PQ8N8H1 164 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 OR51H1Q8NH63 302 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 LAMP3Q9UQV4 416 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 ELOA3CA0A087WX78 387 aaPredicted RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 KIR2DS1A0A191URI9 304 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 EN2P19622 333 aaPredicted RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 EIF1P41567 113 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms