RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 SMIM17P0DL12 118 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 SLC17A1Q14916 467 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 PLPP6Q8IY26 295 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 ST3GAL6Q9Y274 331 aa16.63■□□□□ 0.25
SHANK1-202ENST00000359082 DDX60Q8IY21 1712 aaKnown RBP16.62■□□□□ 0.25
SHANK1-202ENST00000359082 SPRY3O43610 288 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 B3GALNT1O75752 331 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 RSPO2Q6UXX9 243 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-202ENST00000359082 ACY3Q96HD9 319 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 TMPRSS5Q9H3S3 457 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 RFPL4AA6NLU0 287 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 RFPL4AL1F8VTS6 287 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 TOX4O94842 621 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 GABRB1P18505 474 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 CDK5Q00535 292 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 CXorf67Q86X51 503 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-202ENST00000359082 IER2Q9BTL4 223 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 JAM3Q9BX67 310 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 DPTQ07507 201 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 SLC25A26Q70HW3 274 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 OSR2Q8N2R0 312 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 OR10V1Q8NGI7 309 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF230Q9UIE0 474 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF785A8K8V0 405 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 MBP02144 154 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 ENDOGQ14249 297 aaKnown RBP16.62■□□□□ 0.25
SHANK1-202ENST00000359082 RGS7BPQ6MZT1 257 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-202ENST00000359082 SMIM7Q9BQ49 75 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 SRRQ9GZT4 340 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 C12orf10Q9HB07 376 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 TCRBV5S1A1TA0A578 114 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 COX5AP20674 150 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 AKR7LQ8NHP1 331 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 ST8SIA1Q92185 356 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 TXNIPQ9H3M7 391 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF320A2RRD8 509 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 OR5M9Q8NGP3 310 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 MOB3AQ96BX8 217 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 NARFLQ9H6Q4 476 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 FRG2CA6NGY1 282 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 KRTDAPP60985 99 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 VASH2Q86V25 355 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 ARHGEF39Q8N4T4 335 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 PLRG1O43660 514 aaKnown RBP16.61■□□□□ 0.25
SHANK1-202ENST00000359082 FOXF1Q12946 379 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 FZD2Q14332 565 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 LYG2Q86SG7 212 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 SOX15O60248 233 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 CAPZBP47756 277 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 SMIM19Q96E16 107 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 VPS25Q9BRG1 176 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF586Q9NXT0 402 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 UPK1AO00322 258 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 SNCGO76070 127 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 OR5H8P0DN80 308 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 BSGP35613 385 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 NCR3LG1Q68D85 454 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 CYHR1Q6ZMK1 362 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 SIGLEC11Q96RL6 698 aa16.61■□□□□ 0.25
SHANK1-202ENST00000359082 PHF7Q9BWX1 381 aaPredicted RBP16.61■□□□□ 0.25
SHANK1-202ENST00000359082 RRASP10301 218 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 GFERP55789 205 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 SLC38A6Q8IZM9 456 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 NOXO1Q8NFA2 376 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 GPR31O00270 319 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF17P17021 662 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 SLC6A12P48065 614 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 MRGPRX4Q96LA9 322 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 FBXO34Q9NWN3 711 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 FZR1Q9UM11 496 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 ALS2Q96Q42 1657 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 IFITM5A6NNB3 132 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 PGFP49763 221 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 CCL7P80098 99 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 OR2M7Q8NG81 312 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 SHISA8B8ZZ34 492 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 M0QZ24 198 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 RBP4P02753 201 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 GNG10P50151 68 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF528Q3MIS6 628 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 LINC00299Q6ZSB3 139 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 GALMQ96C23 342 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 A4GNTQ9UNA3 340 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 OXA1LQ15070 435 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF628Q5EBL2 1059 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 OR1J1Q8NGS3 322 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 OR2T6Q8NHC8 308 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 CDCA4Q9BXL8 241 aa16.6■□□□□ 0.25
SHANK1-202ENST00000359082 GUCA2AQ02747 115 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 CIB3Q96Q77 187 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 ESRP2Q9H6T0 727 aaKnown RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 TCRBV5S2A0A599 114 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 TMEM267Q0VDI3 215 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 ZNF485Q8NCK3 441 aa16.59■□□□□ 0.25
SHANK1-202ENST00000359082 PLEKHB1Q9UF11 243 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-202ENST00000359082 CLEC18AA5D8T8 446 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms