RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 GALNT16Q8N428 558 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 BHLHE23Q8NDY6 225 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 LYPD6BQ8NI32 183 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 DCUN1D4Q92564 292 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 SYNPO2LQ9H987 977 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 Q9N2J8 555 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 HINT3Q9NQE9 182 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 ZNF282Q9UDV7 671 aaPredicted RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 MTFP1Q9UDX5 166 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 TCFL5Q9UL49 500 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 FARSAQ9Y285 508 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 NOP16Q9Y3C1 178 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 PUS1Q9Y606 427 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 PRRC2CQ9Y520 2896 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR2J2O76002 312 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 CD3DP04234 171 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 HLA-GP17693 338 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 CD22P20273 847 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 IMPA1P29218 277 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC6A9P48067 706 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR12D2P58182 307 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 BATFQ16520 125 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 SYPL1Q16563 259 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 GUK1Q16774 197 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 AADACL3Q5VUY0 350 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 DCXRQ7Z4W1 244 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR8S1Q8NH09 359 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 SFXN5Q8TD22 340 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 ZNF480Q8WV37 535 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 NEIL2Q969S2 332 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 ADAD1Q96M93 576 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 GPR87Q9BY21 358 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 TRIM2Q9C040 744 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 MED20Q9H944 212 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 HAO2Q9NYQ3 351 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR5V1Q9UGF6 321 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 STEAP1Q9UHE8 339 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 POLR3KQ9Y2Y1 108 aaPredicted RBP8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 PPIAL4AQ9Y536 164 aa8.33□□□□□ -1.08
SMARCAL1-202ENST00000358207 RP1P56715 2156 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 FEZF1A0PJY2 475 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 C20orf202A1L168 122 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 EEF1E1-BLOC1S5C9J1V9 151 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 ZNF264O43296 627 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 DFFBO76075 338 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SCAF4O95104 1147 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 GPANK1O95872 356 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 GCGP01275 180 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 CST2P09228 141 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR13C7P0DN81 318 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 MAOAP21397 527 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SNCAP37840 140 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 CDC34P49427 236 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 PFN3P60673 137 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 RAP1BP61224 184 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 TBPL1P62380 186 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 DMKNQ6E0U4 476 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 MEX3BQ6ZN04 569 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SMPDL3AQ92484 453 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 S100A16Q96FQ6 103 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC41A3Q96GZ6 507 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 ALKBH7Q9BT30 221 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC12A9Q9BXP2 914 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 PARP11Q9NR21 331 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 CNIH4Q9P003 139 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SRPK3Q9UPE1 567 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 V9GYS6 101 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 ASCC3Q8N3C0 2202 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 J3QLW9 94 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 DOK2O60496 412 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 PNPP00491 289 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 CATP04040 527 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 TK1P04183 234 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 CELA2BP08218 269 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 ZNF19P17023 458 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 PTGER1P34995 402 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SULT1A2P50226 295 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 RAB7AP51149 207 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 KLF3P57682 345 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 RPS11P62280 158 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 PRAMEF17Q5VTA0 474 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 NUP54Q7Z3B4 507 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 NUFIP2Q7Z417 695 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 TMEM183AQ8IXX5 376 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 TAAR8Q969N4 342 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 HAVCR1Q96D42 359 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 C4orf36Q96KX1 117 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 HDAC8Q9BY41 377 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 OR2J1Q9GZK6 312 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC25A18Q9H1K4 315 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC26A1Q9H2B4 701 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 SLC32A1Q9H598 525 aa8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 WSB2Q9NYS7 404 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-202ENST00000358207 DAPL1A0PJW8 107 aa8.31□□□□□ -1.08
SMARCAL1-202ENST00000358207 IFITM5A6NNB3 132 aa8.31□□□□□ -1.08
SMARCAL1-202ENST00000358207 M0R3H8 397 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms