RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 OR2T27Q8NH04 317 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 FAM3DQ96BQ1 224 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 HIST1H2AAQ96QV6 131 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 LGR4Q9BXB1 951 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 OR11A1Q9GZK7 315 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 SH3BGRL2Q9UJC5 107 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 CYP8B1Q9UNU6 501 aa9.52□□□□□ -0.88
CAPN3-203ENST00000349748 MRPS2Q9Y399 296 aaKnown RBP9.52□□□□□ -0.88
CAPN3-203ENST00000349748 A0A087WWC5 75 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 KLF8O95600 359 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-203ENST00000349748 DANCRP0C864 163 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 FCGR2CP31995 323 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 HIKESHIQ53FT3 197 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 C12orf76Q8N812 135 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-203ENST00000349748 MARCH1Q8TCQ1 289 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 HAS2Q92819 552 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 MSL2Q9HCI7 577 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 CLDND1Q9NY35 253 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 ZDHHC3Q9NYG2 299 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 LUZP4Q9P127 313 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 SCN5AQ14524 2016 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 DOCK6Q96HP0 2047 aa9.52□□□□□ -0.89
CAPN3-203ENST00000349748 A0A0U1RQV5 110 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 K7ERQ8 282 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CDC40O60508 579 aaKnown RBP eCLIP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 PNPP00491 289 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 HMGN2P05204 90 aaKnown RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 RPL12P30050 165 aaKnown RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 LMAN2Q12907 356 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ARHGAP19Q14CB8 494 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 DCXRQ7Z4W1 244 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 S100A7AQ86SG5 101 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 OR6K6Q8NGW6 343 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 OR4K15Q8NH41 348 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 MRGPRDQ8TDS7 321 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ERGIC1Q969X5 290 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM106AQ96A25 262 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 VWCEQ96DN2 955 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 BCL2L10Q9HD36 194 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CACNA1CQ13936 2221 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 LOC105371242A0A075B767 164 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 TLCD2A6NGC4 264 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 GLOD5A6NK44 160 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 OR2AG2A6NM03 316 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF705FA8MVS1 300 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 K7EP13 123 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 TAAR5O14804 337 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF264O43296 627 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CKMP06732 381 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF705DP0CH99 300 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF705BP0CI00 300 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 LYL1P12980 280 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CD33P20138 364 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 MAPK8P45983 427 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ATP6V1FQ16864 119 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 COL5A1-AS1Q5SY13 56 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 FAHD2BQ6P2I3 314 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 Q6ZVU0 165 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CACUL1Q86Y37 369 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF584Q8IVC4 421 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 GCNT2Q8N0V5 402 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CYB561D1Q8N8Q1 229 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 FAM213BQ8TBF2 198 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 FAHD2AQ96GK7 314 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF514Q96K75 400 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 PRRT1Q99946 306 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 METTL8Q9H825 291 aaKnown RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 FKBP11Q9NYL4 201 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 HEATR5AQ86XA9 2040 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 A0A1W2PN81 502 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF860A6NHJ4 632 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 TRDCB7Z8K6 153 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 OR2J2O76002 312 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 JTBO76095 146 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 NDUFB8O95169 186 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 UMODP07911 640 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 RHOCP08134 193 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CHRNA7P36544 502 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 MMP16P51512 607 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 RHOAP61586 193 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 H3F3AP84243 136 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CHRFAM7AQ494W8 412 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 CNKSR3Q6P9H4 555 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 GJD3Q8N144 294 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 GBGT1Q8N5D6 347 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 NUDT11Q96G61 164 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-203ENST00000349748 GPR62Q9BZJ7 368 aa9.51□□□□□ -0.89
CAPN3-203ENST00000349748 PLPP1O14494 284 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 CXCL10P02778 98 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 MPC1LP0DKB6 136 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 HRH1P35367 487 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 KLF3P57682 345 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 FAM3AP98173 230 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 SSBP1Q04837 148 aaKnown RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 GAS6Q14393 721 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 C1orf53Q5VUE5 145 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms