RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 XRCC2O43543 280 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 SULT1B1O43704 296 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 RAD51DO75771 328 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 CD37P11049 281 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 AZGP1P25311 298 aaKnown RBP16.24■□□□□ 0.19
PTN-201ENST00000348225 HOXC12P31275 282 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 APLNRP35414 380 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 RANBP1P43487 201 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 CLDN12P56749 244 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 ZNF529Q6P280 563 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 BAIAP2L2Q6UXY1 529 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 SNX29P2Q8IUI4 249 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 OR8H2Q8N162 312 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 JAGN1Q8N5M9 183 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 OR13C9Q8NGT0 318 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 PP6455Q8WZ26 134 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 AKAP1Q92667 903 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTN-201ENST00000348225 STARD4Q96DR4 205 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 SDHCQ99643 169 aaPredicted RBP16.24■□□□□ 0.19
PTN-201ENST00000348225 B3GNT2Q9NY97 397 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 OR5V1Q9UGF6 321 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 BSNQ9UPA5 3926 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 BOD1L1Q8NFC6 3051 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 SVILO95425 2214 aa16.24■□□□□ 0.19
PTN-201ENST00000348225 LOC100509620A0A075B734 347 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 C5orf49A4QMS7 147 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 A6NIN4 97 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 LYZL6O75951 148 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 IFITM3Q01628 133 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 RBPJQ06330 500 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 RIN1Q13671 783 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 GABRA6Q16445 453 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 BEND4Q6ZU67 534 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 GABRG1Q8N1C3 465 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 OR4M1Q8NGD0 313 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 BOD1Q96IK1 185 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 SORCS2Q96PQ0 1159 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 TMEM8BA6NDV4 472 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 MAGEB3O15480 346 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 TOXO94900 526 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 CGAP01215 116 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 CCNOP22674 350 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 HTR2CP28335 458 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 CAPZA1P52907 286 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 KLRB1Q12918 225 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 P2RY6Q15077 328 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 GLYATL3Q5SZD4 288 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 FAM166AQ6J272 317 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 COLCA1Q6ZS62 124 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 MDP1Q86V88 176 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 LYSMD2Q8IV50 215 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 SEMA6DQ8NFY4 1073 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 OR2AE1Q8NHA4 323 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 RAB40AQ8WXH6 277 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 UQCC2Q9BRT2 126 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 SFXN3Q9BWM7 321 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 PPP1R3EQ9H7J1 279 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 RABL2AQ9UBK7 228 aaPredicted RBP16.23■□□□□ 0.19
PTN-201ENST00000348225 RABL2BQ9UNT1 228 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 PIGLQ9Y2B2 252 aa16.23■□□□□ 0.19
PTN-201ENST00000348225 OCMP0CE72 109 aaPredicted RBP16.22■□□□□ 0.19
PTN-201ENST00000348225 NR4A2P43354 598 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 MAP2K3P46734 347 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 PITPNBP48739 271 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 ART1P52961 327 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 P2RY14Q15391 338 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 C1orf100Q5SVJ3 147 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 STEAP3Q658P3 488 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 PYHIN1Q6K0P9 492 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 CDH26Q8IXH8 852 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 C17orf78Q8N4C9 275 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 ZNF610Q8N9Z0 462 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 APOBEC3DQ96AK3 386 aaPredicted RBP16.22■□□□□ 0.19
PTN-201ENST00000348225 POM121L2Q96KW2 1035 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 OPN3Q9H1Y3 402 aaPredicted RBP16.22■□□□□ 0.19
PTN-201ENST00000348225 METTL17Q9H7H0 456 aaPredicted RBP16.22■□□□□ 0.19
PTN-201ENST00000348225 ASF1BQ9NVP2 202 aa16.22■□□□□ 0.19
PTN-201ENST00000348225 CGGBP1Q9UFW8 167 aaPredicted RBP16.22■□□□□ 0.19
PTN-201ENST00000348225 ATMQ13315 3056 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 LOC100289279A0A1B0GTE1 492 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 SERPINA5P05154 406 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 CEACAM8P31997 349 aaPredicted RBP16.21■□□□□ 0.19
PTN-201ENST00000348225 DEFA1P59665 94 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 DEFA3P59666 94 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 RIPPLY1Q0D2K3 151 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 MALLQ13021 153 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 MADCAM1Q13477 382 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 UTS2BQ765I0 119 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 DOLPP1Q86YN1 238 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 ZNF584Q8IVC4 421 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 FAM3DQ96BQ1 224 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 CHST5Q9GZS9 411 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 ABCG5Q9H222 651 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 ZNF835Q9Y2P0 537 aa16.21■□□□□ 0.19
PTN-201ENST00000348225 ALX3O95076 343 aa16.2■□□□□ 0.18
PTN-201ENST00000348225 ALDOBP05062 364 aa16.2■□□□□ 0.18
PTN-201ENST00000348225 GLI4P10075 376 aa16.2■□□□□ 0.18
PTN-201ENST00000348225 IL7P13232 177 aa16.2■□□□□ 0.18
PTN-201ENST00000348225 EDN3P14138 238 aa16.2■□□□□ 0.18
PTN-201ENST00000348225 FAHP16930 419 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms