RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 NINQ8N4C6 2090 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 SFT2D2O95562 160 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 DUS4LO95620 317 aaKnown RBP15.78■□□□□ 0.12
SPAST-202ENST00000345662 FAM78AQ5JUQ0 283 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 SLC35G3Q8N808 338 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 SLC39A7Q92504 469 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 THAP10Q9P2Z0 257 aaPredicted RBP15.78■□□□□ 0.12
SPAST-202ENST00000345662 PLSCR5A0PG75 271 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 ZNF814B7Z6K7 855 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 ERVH48-1M5A8F1 160 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 GUSBP08236 651 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 RAB32Q13637 225 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 COTL1Q14019 142 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 TIGITQ495A1 244 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 PLA1AQ53H76 456 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
SPAST-202ENST00000345662 TMEM272A0A1B0GTI8 110 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 A0A1W2PPH5 198 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 ENPP1P22413 925 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 NR0B2Q15466 257 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 C9orf152Q5JTZ5 239 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 OTPQ5XKR4 325 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 TOMM20LQ6UXN7 152 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 RSPO2Q6UXX9 243 aaPredicted RBP15.78■□□□□ 0.12
SPAST-202ENST00000345662 LANCL3Q6ZV70 420 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 ETFBKMTQ8IXQ9 262 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 BCL7CQ8WUZ0 217 aaPredicted RBP15.78■□□□□ 0.12
SPAST-202ENST00000345662 EDEM2Q9BV94 578 aa15.78■□□□□ 0.12
SPAST-202ENST00000345662 TRBV5-3A0A0A0MS03 114 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 TRAF3IP2O43734 574 aaPredicted RBP15.77■□□□□ 0.12
SPAST-202ENST00000345662 PPICP45877 212 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 FAM210BQ96KR6 192 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 FGF22Q9HCT0 170 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 NOSIPQ9Y314 301 aaKnown RBP15.77■□□□□ 0.12
SPAST-202ENST00000345662 A0A087X0M5 115 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 A0A1B0GX30 115 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 FAM221AA4D161 298 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 C2orf72A6NCS6 295 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 PRAMEF25A6NGN4 478 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 FIGNL2A6NMB9 653 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 H3BNC9 293 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 ABCD3P28288 659 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 MPGP29372 298 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 NCMAPQ5T1S8 102 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 TMEM37Q8WXS4 190 aa15.77■□□□□ 0.12
SPAST-202ENST00000345662 LINC00615Q96LM1 132 aaPredicted RBP15.77■□□□□ 0.12
SPAST-202ENST00000345662 J3QR89 54 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 DEGS1O15121 323 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 CRYBA1P05813 215 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 HNRNPA3P51991 378 aaKnown RBP15.77■□□□□ 0.11
SPAST-202ENST00000345662 SLC25A1P53007 311 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 OR2A1Q8NGT9 310 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 BADQ92934 168 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 NTNG2Q96CW9 530 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 PSENENQ9NZ42 101 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 MYH14Q7Z406 1995 aaKnown RBP15.77■□□□□ 0.11
SPAST-202ENST00000345662 ELOA3CA0A087WX78 387 aaPredicted RBP15.77■□□□□ 0.11
SPAST-202ENST00000345662 C7orf66A4D0T2 115 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 LHFPL2Q6ZUX7 228 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 SYT13Q7L8C5 426 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 C20orf141Q9NUB4 165 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 TBC1D29Q9UFV1 150 aa15.77■□□□□ 0.11
SPAST-202ENST00000345662 IAPPP10997 89 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 CD1CP29017 333 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 AWAT1Q58HT5 328 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 PPP1R3BQ86XI6 285 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 KDF1Q8NAX2 398 aaPredicted RBP15.76■□□□□ 0.11
SPAST-202ENST00000345662 OR4C5Q8NGB2 326 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 C16orf52Q8NHV5 167 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 TOX4O94842 621 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 CD38P28907 300 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 BTG2P78543 158 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 NXPE3Q969Y0 559 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 A0A0B4J2E0 115 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 A0A1B0GX12 115 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 M0R135 149 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 TIMP1P01033 207 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 TCN2P20062 427 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 FKBP2P26885 142 aaKnown RBP15.76■□□□□ 0.11
SPAST-202ENST00000345662 WDR38Q5JTN6 314 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 FAM162BQ5T6X4 162 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 DMKNQ6E0U4 476 aaPredicted RBP15.76■□□□□ 0.11
SPAST-202ENST00000345662 TMEM65Q6PI78 240 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 SMIM15Q7Z3B0 74 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 CA13Q8N1Q1 262 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 CHAC2Q8WUX2 184 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 ZNF799Q96GE5 643 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 USB1Q9BQ65 265 aaKnown RBP15.76■□□□□ 0.11
SPAST-202ENST00000345662 CTDSP1Q9GZU7 261 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 FAM234AQ9H0X4 552 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 BOKQ9UMX3 212 aaPredicted RBP15.76■□□□□ 0.11
SPAST-202ENST00000345662 RREB1Q92766 1687 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 A0A087WUJ7 227 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 TLCD2A6NGC4 264 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 CST7O76096 145 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 CARD18P57730 90 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 C21orf58P58505 322 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 PPP1CBP62140 327 aa15.76■□□□□ 0.11
SPAST-202ENST00000345662 MRPL58Q14197 206 aaKnown RBP15.76■□□□□ 0.11
SPAST-202ENST00000345662 SOX7Q9BT81 388 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms