RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 A0A0A6YYD5 115 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 WDR1O75083 606 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 VSIG10L2P0DP72 767 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 PNLIPP16233 465 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 RAB13P51153 203 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 PIGPP57054 158 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 MALLQ13021 153 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 C11orf87Q6NUJ2 197 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 RBMS3Q6XE24 437 aaKnown RBP7.03□□□□□ -1.28
KPNA1-201ENST00000344337 LINC00696Q6ZRV3 163 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 ADGRE4PQ86SQ3 457 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 BAP18Q8IXM2 172 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 CPNE4Q96A23 557 aaPredicted RBP7.03□□□□□ -1.28
KPNA1-201ENST00000344337 DCBLD2Q96PD2 775 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 TMEM204Q9BSN7 226 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 PBX4Q9BYU1 374 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 FAM212BQ9NTI7 297 aaPredicted RBP7.03□□□□□ -1.28
KPNA1-201ENST00000344337 ZFP57Q9NU63 452 aa7.03□□□□□ -1.28
KPNA1-201ENST00000344337 C17orf113A0A1B0GUU1 675 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 RNASEK-C17orf49H0YIS7 233 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 MMP9P14780 707 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 CD1CP29017 333 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 RPL12P30050 165 aaKnown RBP7.02□□□□□ -1.28
KPNA1-201ENST00000344337 GABRA2P47869 451 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 RNF113BQ8IZP6 322 aaKnown RBP7.02□□□□□ -1.28
KPNA1-201ENST00000344337 FAAP24Q9BTP7 215 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 SLC19A3Q9BZV2 496 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 LMAN1LQ9HAT1 526 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 AK3Q9UIJ7 227 aa7.02□□□□□ -1.28
KPNA1-201ENST00000344337 A0A1W2PPQ1 181 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 TIMP1P01033 207 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CEACAM5P06731 702 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 THBS1P07996 1170 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 HLA-DOBP13765 273 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 LAP3P28838 519 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 MEF2DQ14814 521 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ZNF880Q6PDB4 577 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 THNSL2Q86YJ6 484 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ZNF100Q8IYN0 542 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CHCHD4Q8N4Q1 142 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 GIMAP5Q96F15 307 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 PPP1R3EQ9H7J1 279 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 EXOSC3Q9NQT5 275 aaKnown RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ARFGEF3Q5TH69 2177 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 C9J4A7 227 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 SOCS1O15524 211 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 GNRH1P01148 92 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 DUSP8Q13202 625 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 KIR2DS3Q14952 304 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ZNF239Q16600 458 aaKnown RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 NKAIN1Q4KMZ8 207 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 EOGTQ5NDL2 527 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ATPAF1Q5TC12 328 aaPredicted RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CNEP1R1Q8N9A8 125 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 OR14A16Q8NHC5 309 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 SLAMF6Q96DU3 332 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 MALSU1Q96EH3 234 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ZGRF1Q86YA3 2104 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ABCA4P78363 2273 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CD300LBA8K4G0 201 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 GPRIN2O60269 458 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 SEMA7AO75326 666 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 PRB4P10163 310 aaPredicted RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ZNF121P58317 390 aaPredicted RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 RAP1AP62834 184 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CLPPQ16740 277 aaPredicted RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 MOGAT2Q3SYC2 334 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ELFN2Q5R3F8 820 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 C1orf140Q5VVS0 124 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 FAM109BQ6ICB4 259 aaPredicted RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 NPSR1Q6W5P4 371 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 MRPL21Q7Z2W9 205 aaKnown RBP7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CLEC1AQ8NC01 280 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 GNRHR2Q96P88 292 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 SYT3Q9BQG1 590 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 WNT16Q9UBV4 365 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 MEGF11A6BM72 1044 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 AQP7P3A6NL99 342 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 SHOXO15266 292 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 IGHA1P01876 353 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 ZNF728P0DKX0 622 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 PLA2G2FQ9BZM2 168 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 CNTD2Q9H8S5 307 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 GLS2Q9UI32 602 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 FZR1Q9UM11 496 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 TRAPPC4Q9Y296 219 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 DOCK4Q8N1I0 1966 aa7.02□□□□□ -1.29
KPNA1-201ENST00000344337 PPP1R2P9O14990 202 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 ATXN7O15265 892 aaPredicted RBP7.01□□□□□ -1.29
KPNA1-201ENST00000344337 YKT6O15498 198 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 IL11P20809 199 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 ZP3P21754 424 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 DGAT2L6Q6ZPD8 337 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 OR5AP2Q8NGF4 316 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 OR51F2Q8NH61 342 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 MFRPQ9BY79 579 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 PIGMQ9H3S5 423 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 MED17Q9NVC6 651 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 FLVCR1Q9Y5Y0 555 aa7.01□□□□□ -1.29
KPNA1-201ENST00000344337 SIPA1L1O43166 1804 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms