RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SLC37A1P57057 533 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 SLC22A25Q6T423 547 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 DTWD2Q8NBA8 298 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 PCED1AQ9H1Q7 454 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TRAPPC2LQ9UL33 140 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ZNF587BE7ETH6 402 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 WNT11O96014 354 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 IFNA17P01571 189 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 SELENOPP49908 381 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 NXPH1P58417 271 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 HLXQ14774 488 aaPredicted RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 TMEM128Q5BJH2 165 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 CRIPAKQ8N1N5 446 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TMEM217Q8N7C4 229 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ZBTB44Q8NCP5 570 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ZPLD1Q8TCW7 415 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TM4SF19Q96DZ7 209 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TAF9BQ9HBM6 251 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 FLVCR1Q9Y5Y0 555 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 GSTZ1O43708 216 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 ADRB1P08588 477 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 SULT1A3P0DMM9 295 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 SULT1A4P0DMN0 295 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 CD46P15529 392 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 USF2Q15853 346 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 CDH26Q8IXH8 852 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ZNF321PQ8N8H1 164 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 CADM4Q8NFZ8 388 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 OR10G3Q8NGC4 313 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 RTN4IP1Q8WWV3 396 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 UBL7Q96S82 380 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 PFDN5Q99471 154 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 IGHV3-15A0A0B4J1V0 119 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 TMEM272A0A1B0GTI8 110 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 FAM166BA8MTA8 275 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ZNF354AO60765 605 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 ZNF626Q68DY1 528 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 SIGIRRQ6IA17 410 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 PLXDC2Q6UX71 529 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 C9orf62Q8N4C0 152 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 OR9K2Q8NGE7 335 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 KIR2DS1A0A191URI9 304 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 TRIM64BA6NI03 449 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 SEMA7AO75326 666 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 IGKV1D-16P01601 117 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 B4GALT1P15291 398 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 KIR2DS4P43632 304 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 NANOS3P60323 173 aaKnown RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 KIR2DS1Q14954 304 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 RAB11FIP2Q7L804 512 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ALKBH3Q96Q83 286 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 NELFAQ9H3P2 528 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 KCNK15Q9H427 330 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 GHRLQ9UBU3 117 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ST6GALNAC2Q9UJ37 374 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 BRWD3Q6RI45 1802 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 PLPP3O14495 311 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 CTDSPLO15194 276 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 RPL12P30050 165 aaKnown RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 SKP2Q13309 424 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ZNF266Q14584 549 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 FAM199XQ6PEV8 388 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 RFLNBQ8N5W9 214 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 OR51A2Q8NGJ7 313 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 PTPMT1Q8WUK0 201 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 PP6455Q8WZ26 134 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 APH1AQ96BI3 265 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 TMEM231Q9H6L2 316 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ZNF275Q9NSD4 429 aaPredicted RBP6.44□□□□□ -1.38
VCAN-202ENST00000342785 NBASA2RRP1 2371 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ATP6V1G2-DDX39BF2Z307 99 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 JTBO76095 146 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 CHATP28329 748 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 PPP1R1AQ13522 171 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ZNF674Q2M3X9 581 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 OR11H7Q8NGC8 314 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 ASB13Q8WXK3 278 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 RDH5Q92781 318 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 MYOTQ9UBF9 498 aa6.44□□□□□ -1.38
VCAN-202ENST00000342785 TXNL1O43396 289 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 NRASP01111 189 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ZNF250P15622 560 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 FCGR2CP31995 323 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 NKX2-1P43699 371 aaPredicted RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 S100A12P80511 92 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 MSMO1Q15800 293 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 C11orf87Q6NUJ2 197 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 SLC25A26Q70HW3 274 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CDC20BQ86Y33 519 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 OR52N4Q8NGI2 321 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 OR51H1Q8NH63 302 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ST7LQ8TDW4 575 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CHAC2Q8WUX2 184 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 C2orf50Q96LR7 162 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CCDC74BQ96LY2 380 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 GHITMQ9H3K2 345 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 SLCO1B1Q9Y6L6 691 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 PARP14Q460N5 1801 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms