RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 GAR1Q9NY12 217 aaKnown RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 OR2C1O95371 312 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 SDHBP21912 280 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 FOXB1Q99853 325 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 SLCO1C1Q9NYB5 712 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 DBX1A6NMT0 343 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 GOSR1O95249 250 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 PDGFBP01127 241 aaPredicted RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 IGLV3-25P01717 112 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 HRH1P35367 487 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 THBS4P35443 961 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ISL1P61371 349 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 GSG1Q2KHT4 349 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 STAC2Q6ZMT1 411 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 OR13C5Q8NGS8 318 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ERGIC1Q969X5 290 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF416Q9BWM5 594 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 KIAA0141Q14154 515 aaPredicted RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF787Q6DD87 383 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 POM121L2Q96KW2 1035 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ARRDC5A6NEK1 342 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ITGBL1O95965 494 aaPredicted RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF816Q0VGE8 651 aaPredicted RBP13.75□□□□□ -0.21
COL11A2-201ENST00000341947 AQP6Q13520 282 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ACOT7LQ6ZUV0 252 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 CDH26Q8IXH8 852 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 SLC38A6Q8IZM9 456 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 LHX4Q969G2 390 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 TMEM30CPA0ZSE6 113 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF785A8K8V0 405 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ABCD3P28288 659 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 PGFP49763 221 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 CDK5R1Q15078 307 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ADAT1Q9BUB4 502 aaKnown RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 KLK8O60259 260 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 MGMTP16455 207 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 SNRPNP63162 240 aaKnown RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 PAQR6Q6TCH4 344 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ARHGEF39Q8N4T4 335 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 FBXL6Q8N531 539 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 CHRDL1Q9BU40 450 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 OR51I2Q9H344 312 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 SLC25A37Q9NYZ2 338 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 UMAD1C9J7I0 102 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 SPRY1O43609 319 aaPredicted RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 GABRG2P18507 467 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 CCR2P41597 374 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 PIGPP57054 158 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ASAH1Q13510 395 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 FAM162BQ5T6X4 162 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 NECAP1Q8NC96 275 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ALKBH3Q96Q83 286 aaPredicted RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 PSMB6P28072 239 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 SPEM2Q0P670 501 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ENDOGQ14249 297 aaKnown RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 OR2A1Q8NGT9 310 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 PLA2G3Q9NZ20 509 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 B9D1Q9UPM9 204 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 MYO10Q9HD67 2058 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF727A8MUV8 499 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 MT-CO3P00414 261 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 RPS27P42677 84 aaKnown RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 GPR119Q8TDV5 335 aa13.74□□□□□ -0.21
COL11A2-201ENST00000341947 MYH9P35579 1960 aaKnown RBP13.74□□□□□ -0.21
COL11A2-201ENST00000341947 TRBV5-4A0A0C4DH59 114 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 FBP1P09467 338 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 FGF7P21781 194 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 CDAP32320 146 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 H3F3CQ6NXT2 135 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 Q6ZS52 159 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 SLC36A1Q7Z2H8 476 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 OR1F12Q8NHA8 337 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
COL11A2-201ENST00000341947 A0A0A6YYD5 115 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 RNPS1Q15287 305 aaKnown RBP13.73□□□□□ -0.21
COL11A2-201ENST00000341947 STUMQ69YW2 141 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 CADM4Q8NFZ8 388 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 OR13D1Q8NGV5 346 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 FAM103A1Q9BTL3 118 aaKnown RBP13.73□□□□□ -0.21
COL11A2-201ENST00000341947 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 WSB2Q9NYS7 404 aaPredicted RBP13.73□□□□□ -0.21
COL11A2-201ENST00000341947 EDIL3O43854 480 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 HPP00738 406 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 WIPI1Q5MNZ9 446 aaPredicted RBP13.73□□□□□ -0.21
COL11A2-201ENST00000341947 CYHR1Q6ZMK1 362 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 A0A087WUJ7 227 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 GPX5O75715 221 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 MEOX1P50221 254 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 OTUD1Q5VV17 481 aaPredicted RBP13.73□□□□□ -0.21
COL11A2-201ENST00000341947 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
COL11A2-201ENST00000341947 LRRC3CA6NJW4 275 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms