RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 CHRM2P08172 466 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ZNF43P17038 809 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 CCL1P22362 96 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ADH6P28332 368 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 CXCL12P48061 93 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 PRKXP51817 358 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 OR2F1Q13607 317 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 TAF13Q15543 124 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 CARD17Q5XLA6 110 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 LCN10Q6JVE6 187 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 COMMD2Q86X83 199 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 PPP1R3BQ86XI6 285 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 KCNRGQ8N5I3 272 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 EIF4E3Q8N5X7 224 aaKnown RBP12.88□□□□□ -0.35
TDP2-201ENST00000341060 FADS6Q8N9I5 356 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 WDSUB1Q8N9V3 476 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ST8SIA2Q92186 375 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 C1orf147Q96MC9 270 aaPredicted RBP12.88□□□□□ -0.35
TDP2-201ENST00000341060 SPACA5Q96QH8 159 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 DMRTA2Q96SC8 542 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 PHB2Q99623 299 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 LPAR5Q9H1C0 372 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 SLC25A32Q9H2D1 315 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
TDP2-201ENST00000341060 ZDBF2Q9HCK1 2354 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 AQP7P3A6NL99 342 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 OR2AT4A6NND4 320 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 CCSO14618 274 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 RER1O15258 196 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 HPP00738 406 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 CYC1P08574 325 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 SLC2A1P11166 492 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 ZNF17P17021 662 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
TDP2-201ENST00000341060 EIF1P41567 113 aaKnown RBP12.87□□□□□ -0.35
TDP2-201ENST00000341060 ZXDAP98168 799 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 TUSC1Q2TAM9 212 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 JMJD6Q6NYC1 403 aaPredicted RBP12.87□□□□□ -0.35
TDP2-201ENST00000341060 GLIPR1L1Q6UWM5 242 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 RNF144BQ7Z419 303 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 BVESQ8NE79 360 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 CCDC74BQ96LY2 380 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 SOX7Q9BT81 388 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 GPR84Q9NQS5 396 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 COQ3Q9NZJ6 369 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
TDP2-201ENST00000341060 MRPS28Q9Y2Q9 187 aaKnown RBP12.87□□□□□ -0.35
TDP2-201ENST00000341060 CHCHD2Q9Y6H1 151 aaPredicted RBP12.87□□□□□ -0.35
TDP2-201ENST00000341060 LOC102725191A0A1B0GVB3 256 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 RAMP1O60894 148 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 HOXD4P09016 255 aaPredicted RBP12.86□□□□□ -0.35
TDP2-201ENST00000341060 GSTP1P09211 210 aaKnown RBP12.86□□□□□ -0.35
TDP2-201ENST00000341060 QDPRP09417 244 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 ANOS1P23352 680 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 SFTPDP35247 375 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 CX3CR1P49238 355 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 MRPL14Q6P1L8 145 aaKnown RBP12.86□□□□□ -0.35
TDP2-201ENST00000341060 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
TDP2-201ENST00000341060 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 KCNG3Q8TAE7 436 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 ST8SIA4Q92187 359 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 ANAPC10Q9UM13 185 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 A0A0A6YYD4 124 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 RNF222A6NCQ9 220 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 CDC14BO60729 498 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 IFNA6P05013 189 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
TDP2-201ENST00000341060 LRRC37A5PQ49AS3 106 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 RTN4RL2Q86UN3 420 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 ELP5Q8TE02 316 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 SEC22AQ96IW7 307 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 FN3KRPQ9HA64 309 aa12.86□□□□□ -0.35
TDP2-201ENST00000341060 ZNF726A6NNF4 738 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 SULT2B1O00204 365 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 EFSO43281 561 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 BCL2L11O43521 198 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 DUS4LO95620 317 aaKnown RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 NAT1P18440 290 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 OR3A4PP47883 348 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 GRB2P62993 217 aaKnown RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 TAGLNQ01995 201 aaKnown RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 DOK3Q7L591 496 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 NAA40Q86UY6 237 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 HOGA1Q86XE5 327 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 OR4K15Q8NH41 348 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 SSC4DQ8WTU2 575 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 SHARPINQ9H0F6 387 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 TP53I11O14683 189 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 SIGLEC6O43699 453 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 MPIG6BO95866 241 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 HCKP08631 526 aa12.85□□□□□ -0.35
TDP2-201ENST00000341060 HIST1H1DP16402 221 aaKnown RBP12.85□□□□□ -0.35
TDP2-201ENST00000341060 ATP1B3P54709 279 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms