RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ANXA2P07355 339 aaKnown RBP12.97□□□□□ -0.33
VAPA-201ENST00000340541 PCMT1P22061 227 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 MMP16P51512 607 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 ALDH3A2P51648 485 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 PSMA6P60900 246 aaKnown RBP12.97□□□□□ -0.33
VAPA-201ENST00000340541 ROM1Q03395 351 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 SLC3A1Q07837 685 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 MAB21L1Q13394 359 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 CBR4Q8N4T8 237 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 SPRYD4Q8WW59 207 aaPredicted RBP12.97□□□□□ -0.33
VAPA-201ENST00000340541 RAB1CQ92928 201 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 CNN2Q99439 309 aaKnown RBP12.97□□□□□ -0.33
VAPA-201ENST00000340541 OPA3Q9H6K4 179 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 HAO2Q9NYQ3 351 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 LAMP5Q9UJQ1 280 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 PPP1R3CQ9UQK1 317 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 LRP12Q9Y561 859 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 IGHV3-64DA0A0J9YX35 117 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 hCG_38984A0A1B0GV85 526 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 GGT3PA6NGU5 568 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 SLC22A31A6NKX4 558 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 TBX1O43435 398 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 IGHV2-70P01814 119 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 CA6P23280 308 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 PMELP40967 661 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 GATA4P43694 442 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 RAD23AP54725 363 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 FAM3AP98173 230 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 GID4Q8IVV7 300 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 OR56B2PQ8NGI1 322 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 UBE2FQ969M7 185 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 TIMD4Q96H15 378 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 HRASLS5Q96KN8 279 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 OR8B4Q96RC9 309 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 SLC29A1Q99808 456 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 ZNF665Q9H7R5 613 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 BRD7Q9NPI1 651 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 MRPL15Q9P015 296 aaKnown RBP12.96□□□□□ -0.33
VAPA-201ENST00000340541 NPTNQ9Y639 398 aa12.96□□□□□ -0.33
VAPA-201ENST00000340541 NBEAL1Q6ZS30 2694 aa12.96□□□□□ -0.34
VAPA-201ENST00000340541 B4DSR2 109 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 PSMD9O00233 223 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 IGHV2-5P01817 119 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 CD200P41217 278 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 KCTD18Q6PI47 426 aaPredicted RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 DEGS2Q6QHC5 323 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 KRT77Q7Z794 578 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 ZNF420Q8TAQ5 688 aaPredicted RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 DVL3Q92997 716 aaPredicted RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 REEP6Q96HR9 211 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 MBOAT4Q96T53 435 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 OR10A2Q9H208 303 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 NIPAL2Q9H841 368 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 SP140LQ9H930 580 aa12.95□□□□□ -0.34
VAPA-201ENST00000340541 H2AFY2Q9P0M6 372 aaPredicted RBP12.95□□□□□ -0.34
VAPA-201ENST00000340541 A0A0A6YYJ9 748 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 TCF21O43680 179 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 GMDSO60547 372 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 SBK2P0C263 348 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 HTR1FP30939 366 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 DDOSTP39656 456 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 GSK3AP49840 483 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 DVL1P1P54792 670 aaPredicted RBP12.94□□□□□ -0.34
VAPA-201ENST00000340541 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 OR8G1Q15617 311 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 OR8B8Q15620 311 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 TIGD6Q17RP2 521 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 ZNF181Q2M3W8 571 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 ZIK1Q3SY52 487 aaPredicted RBP12.94□□□□□ -0.34
VAPA-201ENST00000340541 MOGAT3Q86VF5 341 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 SLC35F2Q8IXU6 374 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 ZNF679Q8IYX0 411 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 CELF2-AS1Q8N7Q2 184 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 OR8B12Q8NGG6 310 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 ASB17Q8WXJ9 295 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 EME1Q96AY2 570 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 PGAM5Q96HS1 289 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 LYZL4Q96KX0 146 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 ADAT1Q9BUB4 502 aaKnown RBP12.94□□□□□ -0.34
VAPA-201ENST00000340541 C9orf16Q9BUW7 83 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 TTTY10Q9BZA0 68 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 RGCCQ9H4X1 137 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 CLN6Q9NWW5 311 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 FAM206AQ9NX38 181 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 WARS2Q9UGM6 360 aaKnown RBP12.94□□□□□ -0.34
VAPA-201ENST00000340541 TMEM14AQ9Y6G1 99 aa12.94□□□□□ -0.34
VAPA-201ENST00000340541 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
VAPA-201ENST00000340541 MAGEB4O15481 346 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms