RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SULT1B1O43704 296 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 MMP7P09237 267 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 FAHP16930 419 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 TPTEP56180 551 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 PABPC1L2AQ5JQF8 200 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 NPRL2Q8WTW4 380 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 FCAMRQ8WWV6 532 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 SGK3Q96BR1 496 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 DOCK7Q96N67 2140 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 A0A0U1RQV5 110 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 CIB4A0PJX0 185 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 GABARAPH6UMI1 98 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 HLA-HP01893 362 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 MT-ND4P03905 459 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 LCATP04180 440 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 SLC6A1P30531 599 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 ZNF93P35789 620 aaPredicted RBP19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 AGAP6Q5VW22 663 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 CPEB3Q8NE35 698 aaKnown RBP19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 FAM46BQ96A09 425 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 PHF21AQ96BD5 680 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 FOXRED1Q96CU9 486 aaPredicted RBP19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 RNF122Q9H9V4 155 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 DIABLOQ9NR28 239 aa19.58■□□□□ 0.73
PDLIM2-203ENST00000339162 IGKV1-9A0A0C4DH69 117 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 APOC1P02654 83 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 PCBD1P61457 104 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 KLF9Q13886 244 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 DRAM2Q6UX65 266 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 ADGRE4PQ86SQ3 457 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 METTL17Q9H7H0 456 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 ZNF503-AS2A6NEH8 195 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 DHRS3O75911 302 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 IGHG3P01860 377 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 FCER2P06734 321 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 ECH1Q13011 328 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 OR10A2Q9H208 303 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 PIGLQ9Y2B2 252 aa19.57■□□□□ 0.72
PDLIM2-203ENST00000339162 CEP295Q9C0D2 2601 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 RPL36A-HNRNPH2H7BZ11 118 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 HCKP08631 526 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 AGTR1P30556 359 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 GUCA2AQ02747 115 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 HACD4Q5VWC8 232 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 PGAP1Q75T13 922 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 ZNF627Q7L945 461 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 ANGPTL5Q86XS5 388 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 OR5M9Q8NGP3 310 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 TAAR6Q96RI8 345 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 ZMAT3Q9HA38 289 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 MEIS3P1A6NDR6 274 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 LDLRAD4O15165 306 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 CCR6P51684 374 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 MOGAT2Q3SYC2 334 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 PLA1AQ53H76 456 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 GCNT2Q8N0V5 402 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 ZADH2Q8N4Q0 377 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 OR52H1Q8NGJ2 320 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 UBASH3BQ8TF42 649 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 RABL2AQ9UBK7 228 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 RABL2BQ9UNT1 228 aa19.56■□□□□ 0.72
PDLIM2-203ENST00000339162 PDGFAP04085 211 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 GIFP27352 417 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 PMPCAQ10713 525 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 SNTB2Q13425 540 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 AWAT2Q6E213 333 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 AKAP14Q86UN6 197 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 REEP6Q96HR9 211 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 V9GYS6 101 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 CENPXA8MT69 81 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 K7EM74 188 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 CCL2P13500 99 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 OR3A4PP47883 348 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 TATDN3Q17R31 274 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 TMEM255AQ5JRV8 349 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 NCCRP1Q6ZVX7 275 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 P4HA3Q7Z4N8 544 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 PAQR4Q8N4S7 273 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 RNF170Q96K19 258 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 TRIB1Q96RU8 372 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 NOX3Q9HBY0 568 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 APC2O95996 2303 aa19.55■□□□□ 0.72
PDLIM2-203ENST00000339162 TRAV6A0A075B6T7 132 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 OR6C65A6NJZ3 312 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 ERCC1P07992 297 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 GABRA1P14867 456 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 CCNOP22674 350 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 ACKR3P25106 362 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 MNDAP41218 407 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 NHLH1Q02575 133 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 UNC119Q13432 240 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 UBE2V2Q15819 145 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 FAAP20Q6NZ36 180 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 ACBD4Q8NC06 268 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 OR5D18Q8NGL1 313 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 SNIP1Q8TAD8 396 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 UQCC2Q9BRT2 126 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 PRDM14Q9GZV8 571 aa19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 ELF5Q9UKW6 265 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-203ENST00000339162 RBMX2Q9Y388 322 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms