RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 RNF4P78317 190 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 QRFPP83859 136 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 ACY1Q03154 408 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 PNLIPRP3Q17RR3 467 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 MS4A18Q3C1V0 323 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 GLYATL3Q5SZD4 288 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 ATPAF1Q5TC12 328 aaPredicted RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 C1QL3Q5VWW1 255 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 ZNF660Q6AZW8 331 aaPredicted RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 OR7E24Q6IFN5 339 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 TMEM81Q6P7N7 255 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 PAPD4Q6PIY7 484 aaKnown RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 ZNF813Q6ZN06 617 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 LYG2Q86SG7 212 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 ZNF584Q8IVC4 421 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 PDZD9Q8IXQ8 264 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 BVESQ8NE79 360 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 NFAM1Q8NET5 270 aaPredicted RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 OR13C3Q8NGS6 347 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 CT55Q8WUE5 264 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 SMAD5Q99717 465 aaKnown RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 KLHDC3Q9BQ90 382 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 SHARPINQ9H0F6 387 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 ARL6Q9H0F7 186 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 TMEM138Q9NPI0 162 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 FGF21Q9NSA1 209 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 FAM206AQ9NX38 181 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 GDF2Q9UK05 429 aaPredicted RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 RPH3AQ9Y2J0 694 aaPredicted RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 SPEF1Q9Y4P9 236 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 TRBV6-7A0A0A0MS04 114 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 TRAV14DV4A0A0A6YYC5 116 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 CDC14CA4D256 554 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 RNF222A6NCQ9 220 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 OR2W5A6NFC9 320 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 LIPT2A6NK58 231 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 TMEM14DPA8MWL7 114 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 NUDT19A8MXV4 375 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 C21orf140B9A014 251 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 CA11O75493 328 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 NUDT14O95848 222 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 AMY2AP04746 511 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 HOXD4P09016 255 aaPredicted RBP9.55□□□□□ -0.88
RTN3-201ENST00000338850 ZNF250P15622 560 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 ZBTB25P24278 435 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 FOXK1P85037 733 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 HSF1Q00613 529 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 DHRS2Q13268 280 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 C4orf46Q504U0 113 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 RNASE10Q5GAN6 216 aaKnown RBP9.55□□□□□ -0.88
RTN3-201ENST00000338850 VAX1Q5SQQ9 334 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 THEM4Q5T1C6 240 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 LIN54Q6MZP7 749 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 UQCC3Q6UW78 93 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 Q6ZSR3 168 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 PGAP1Q75T13 922 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 SLC35D2Q76EJ3 337 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 COX15Q7KZN9 410 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 PRR22Q8IZ63 422 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 BPIFB2Q8N4F0 458 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 PLPP7Q8NBV4 271 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 OR4D10Q8NGI6 311 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 OR52B4Q8NGK2 314 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 OR5L2Q8NGL0 311 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 OR13C8Q8NGS7 320 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 SLC25A43Q8WUT9 341 aaPredicted RBP9.55□□□□□ -0.88
RTN3-201ENST00000338850 MITD1Q8WV92 249 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 SLC25A36Q96CQ1 311 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 MRPL13Q9BYD1 178 aaKnown RBP9.55□□□□□ -0.88
RTN3-201ENST00000338850 MFFQ9GZY8 342 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 POFUT1Q9H488 388 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 LDAHQ9H6V9 325 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 AKIRIN1Q9H9L7 192 aaPredicted RBP9.55□□□□□ -0.88
RTN3-201ENST00000338850 SDHAF3Q9NRP4 125 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 RASL12Q9NYN1 266 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 ZNF224Q9NZL3 707 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 GHRLQ9UBU3 117 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 TNFSF18Q9UNG2 199 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 TP53TG5Q9Y2B4 290 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 COA3Q9Y2R0 106 aaPredicted RBP9.55□□□□□ -0.88
RTN3-201ENST00000338850 NAV2Q8IVL1 2488 aa9.55□□□□□ -0.88
RTN3-201ENST00000338850 BSNQ9UPA5 3926 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 FXYD6-FXYD2A0A087WZ82 144 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 TMEM269A0A1B0GVZ9 245 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 VSTM2BA6NLU5 285 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 A8MUA0 341 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 ZNF878C9JN71 531 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 MKRN2OSH3BPM6 223 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 K7EM74 188 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 BCL2L11O43521 198 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 HPP00738 406 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 TTRP02766 147 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 H2BFMP0C1H6 154 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 CTSSP25774 331 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 ADH6P28332 368 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 CD34P28906 385 aa9.54□□□□□ -0.88
RTN3-201ENST00000338850 RPS27P42677 84 aaKnown RBP9.54□□□□□ -0.88
RTN3-201ENST00000338850 ALDH3B1P43353 468 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms