RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 TP53I11O14683 189 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 SMAD9O15198 467 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 RAMP1O60894 148 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 IL2RAP01589 272 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 IFNA6P05013 189 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 CYC1P08574 325 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 MGMTP16455 207 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 CASRP41180 1078 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 PPP1R1AQ13522 171 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 FAHD2BQ6P2I3 314 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 PDZD9Q8IXQ8 264 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 ARL6IP6Q8N6S5 226 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 FAHD2AQ96GK7 314 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 SPACA5Q96QH8 159 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 PNRC2Q9NPJ4 139 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 MRPS28Q9Y2Q9 187 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 KCNK7Q9Y2U2 307 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 CHCHD2Q9Y6H1 151 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 EXPH5Q8NEV8 1989 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 C9orf170A2RU37 121 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 SULT2B1O00204 365 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 TLX3O43711 291 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 HLA-GP17693 338 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 CX3CR1P49238 355 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 SLC35A1P78382 337 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 IL13RA1P78552 427 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 BAMBIQ13145 260 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 PRAMEF20Q5VT98 475 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 C11orf87Q6NUJ2 197 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 OR5AS1Q8N127 324 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 MITD1Q8WV92 249 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 FAM71F1Q96KD3 344 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 PHB2Q99623 299 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 NICN1Q9BSH3 213 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 SOX7Q9BT81 388 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 LPAR5Q9H1C0 372 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 AKIRIN1Q9H9L7 192 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 ZNF318Q5VUA4 2279 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 SDK1Q7Z5N4 2213 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 ARID1BQ8NFD5 2236 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 CABIN1Q9Y6J0 2220 aa13.32□□□□□ -0.28
TNFSF13-201ENST00000338784 CCSO14618 274 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 SSX5O60225 188 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 UBBP0CG47 229 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 SLC25A4P12235 298 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 CCL1P22362 96 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 RPS27AP62979 156 aaKnown RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 UBA52P62987 128 aaKnown RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 GRB2P62993 217 aaKnown RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 ZNF345Q14585 488 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 DOK3Q7L591 496 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 RNF144BQ7Z419 303 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 SLC38A6Q8IZM9 456 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 ZNF283Q8N7M2 679 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 GALNT11Q8NCW6 608 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 KCNG3Q8TAE7 436 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 LINC00052Q96N35 136 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 OCIAD1Q9NX40 245 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 ZNF319Q9P2F9 582 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 OR2AT4A6NND4 320 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 KRBOX1C9JBD0 128 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 OR2F2O95006 317 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 MPIG6BO95866 241 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 RLN2P04090 185 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 HCKP08631 526 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 ZNF17P17021 662 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 NUP62P37198 522 aaPredicted RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 OR2F1Q13607 317 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 TMPPEQ6ZT21 453 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 FAM57BQ71RH2 274 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 KCNRGQ8N5I3 272 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 TMEM104Q8NE00 496 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 OR4K15Q8NH41 348 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 OR1S1Q8NH92 325 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 PPP1R1CQ8WVI7 109 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 ST8SIA4Q92187 359 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 RAB3CQ96E17 227 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 TMEM41AQ96HV5 264 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 C1orf147Q96MC9 270 aaPredicted RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 IER2Q9BTL4 223 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 ZMAT5Q9UDW3 170 aaKnown RBP13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 TNFSF18Q9UNG2 199 aa13.31□□□□□ -0.28
TNFSF13-201ENST00000338784 A0A0A6YYD4 124 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 KANTRA0A1W2PQU2 76 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 A8MXK9 166 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 CDC14BO60729 498 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 PMP2P02689 132 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 GSTP1P09211 210 aaKnown RBP13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 NR2C1P13056 603 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 KLK2P20151 261 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 OR3A4PP47883 348 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 CLDN17P56750 224 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 FAM189A2Q15884 450 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 GFOD2Q3B7J2 385 aa13.3□□□□□ -0.28
TNFSF13-201ENST00000338784 LRRC37A5PQ49AS3 106 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms