RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CDK1P06493 297 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 RPSAP08865 295 aaKnown RBP10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 HTR1AP08908 422 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 LIMS3P0CW19 117 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 LIMS4P0CW20 117 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ATP6V1B1P15313 513 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 PSMB10P40306 273 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ATP5J2P56134 94 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 GFOD2Q3B7J2 385 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 PCGF3Q3KNV8 242 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ALKBH6Q3KRA9 238 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 FDX2Q6P4F2 183 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 COMMD2Q86X83 199 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 OR5AS1Q8N127 324 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 OR8B12Q8NGG6 310 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 OR13G1Q8NGZ3 307 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 PPP1R14AQ96A00 147 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF649Q9BS31 505 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 SLC22A4Q9H015 551 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 DUSP21Q9H596 190 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ISG20L2Q9H9L3 353 aaKnown RBP10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 G6PC2Q9NQR9 355 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ACOXLQ9NUZ1 547 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 FKBP14Q9NWM8 211 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 BABAM2Q9NXR7 383 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF319Q9P2F9 582 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ZDHHC8Q9ULC8 765 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ERGIC3Q9Y282 383 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 NOP16Q9Y3C1 178 aaKnown RBP10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 PCDHGB5Q9Y5G0 923 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 RTTNQ86VV8 2226 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 ASH1LQ9NR48 2969 aaKnown RBP10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 ANKRD30BLA7E2S9 258 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 C17orf100A8MU93 164 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 TPD52L2O43399 206 aaKnown RBP10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 SPRY3O43610 288 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 NAT2P11245 290 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 TNFSF4P23510 183 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 EEF1B2P24534 225 aaKnown RBP10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 C21orf33P30042 268 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 MAP2K3P46734 347 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 PTH2RP49190 550 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 GSK3AP49840 483 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 MMP15P51511 669 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CCR9P51686 369 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 EFNA4P52798 201 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 FAM3AP98173 230 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 MFGE8Q08431 387 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 TMEM244Q5VVB8 128 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 RNLSQ5VYX0 342 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CATSPERDQ86XM0 798 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 FTMTQ8N4E7 242 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CCDC54Q8NEL0 328 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CSNK2A3Q8NEV1 391 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 OR2G2Q8NGZ5 317 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 OR52N1Q8NH53 320 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 OR51E1Q8TCB6 317 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 PELI1Q96FA3 418 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 PERPQ96FX8 193 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 FOXC2Q99958 501 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 RHNO1Q9BSD3 238 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 EGLN1Q9GZT9 426 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 DECR2Q9NUI1 292 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 NKIRAS2Q9NYR9 191 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CLEC2DQ9UHP7 191 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 ITGB1BP2Q9UKP3 347 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 LRRC42Q9Y546 428 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CENPEQ02224 2701 aa10.17□□□□□ -0.78
SPTLC1-202ENST00000337841 CACNA1DQ01668 2161 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 CELSR2Q9HCU4 2923 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 MYL12BO14950 172 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 RGS10O43665 173 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 TTRP02766 147 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF12P17014 697 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 CRHBPP24387 322 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 TGM4P49221 684 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 SLC35A2P78381 396 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 MVKQ03426 396 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 RIPPLY1Q0D2K3 151 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 ALKBH1Q13686 389 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 TSTQ16762 297 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 CCDC58Q4VC31 144 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 RPL22L1Q6P5R6 122 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 DOK3Q7L591 496 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 ZCCHC24Q8N2G6 241 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 NANOGP1Q8N7R0 232 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 SPERTQ8NA61 448 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 BHLHE23Q8NDY6 225 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 OR2Z1Q8NG97 314 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 GATAD2BQ8WXI9 593 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 FAM71F1Q96KD3 344 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 SLC30A2Q9BRI3 323 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 CDCA4Q9BXL8 241 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 CCDC90BQ9GZT6 254 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 TPK1Q9H3S4 243 aa10.16□□□□□ -0.78
SPTLC1-202ENST00000337841 MSL2Q9HCI7 577 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms