RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CYB561A3Q8NBI2 242 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 C19orf18Q8NEA5 215 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 OR51L1Q8NGJ5 315 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 KCNJ15Q99712 375 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 PCGF1Q9BSM1 259 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 COPS4Q9BT78 406 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 TRIM15Q9C019 465 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 SP140LQ9H930 580 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 UNKLQ9H9P5 680 aaKnown RBP8.89□□□□□ -0.99
CAPN3-202ENST00000337571 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
CAPN3-202ENST00000337571 TBC1D23Q9NUY8 699 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 IL20Q9NYY1 176 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 MRPL15Q9P015 296 aaKnown RBP8.89□□□□□ -0.99
CAPN3-202ENST00000337571 BAIAP2Q9UQB8 552 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 CDH10Q9Y6N8 788 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 PKD1L1Q8TDX9 2849 aa8.89□□□□□ -0.99
CAPN3-202ENST00000337571 hCG_1807616A0A1W2PRN6 198 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 A6NLC8 198 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ANKRD30BLA7E2S9 258 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 LGALS8O00214 317 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF593O00488 134 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-202ENST00000337571 BHLHE40O14503 412 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 TMPRSS2O15393 492 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 HOXA3O43365 443 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ADAM20O43506 726 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 DCTN3O75935 186 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 TOX4O94842 621 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 PLATP00750 562 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 GASTP01350 101 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 IFNGP01579 166 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 GRK5P34947 590 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 DDOSTP39656 456 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 PSMB10P40306 273 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 RPS27P42677 84 aaKnown RBP8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ENTPD1P49961 510 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 FGF12P61328 243 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 GNGT1P63211 74 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF92Q03936 586 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 GABPB1Q06547 395 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-202ENST00000337571 SNAI3Q3KNW1 292 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 CYP2R1Q6VVX0 501 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 BRD3OSQ6XYD6 125 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 RASSF6Q6ZTQ3 369 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 SLC37A3Q8NCC5 494 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 OR8S1Q8NH09 359 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 OR2AE1Q8NHA4 323 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 SLAMF6Q96DU3 332 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 C1orf147Q96MC9 270 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-202ENST00000337571 TSSK6Q9BXA6 273 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 OPA3Q9H6K4 179 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF696Q9H7X3 374 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 C1orf123Q9NWV4 160 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 ARL2BPQ9Y2Y0 163 aa8.88□□□□□ -0.99
CAPN3-202ENST00000337571 OOEPA6NGQ2 149 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 P2RY10O00398 339 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 TBX1O43435 398 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 XRCC2O43543 280 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 APOC1P02654 83 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 HSD11B1P28845 292 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 PRKXP51817 358 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 GRB2P62993 217 aaKnown RBP8.87□□□□□ -0.99
CAPN3-202ENST00000337571 TIGD6Q17RP2 521 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 DEFB112Q30KQ8 113 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 PRR31Q5SQ13 230 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 GLYATL3Q5SZD4 288 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 METTL11BQ5VVY1 283 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF841Q6ZN19 808 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 AQP11Q8NBQ7 271 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 OR2T33Q8NG76 320 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 OR9Q2Q8NGE9 314 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 OR9Q1Q8NGQ5 310 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 OR6K6Q8NGW6 343 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 TMIGD2Q96BF3 282 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 OTULINQ96BN8 352 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 FAM71F1Q96KD3 344 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-202ENST00000337571 DDOQ99489 341 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 REEP1Q9H902 201 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 NOX4Q9NPH5 578 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 TNFRSF19Q9NS68 423 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 ARL8BQ9NVJ2 186 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 ACTR3BQ9P1U1 418 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 LYVE1Q9Y5Y7 322 aa8.87□□□□□ -0.99
CAPN3-202ENST00000337571 SOX21Q9Y651 276 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-202ENST00000337571 A0A1B0GUS0 222 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 RIIAD1A6NNX1 92 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 SRRM5B3KS81 715 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF879B4DU55 563 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF878C9JN71 531 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 PTBP3O95758 552 aaKnown RBP8.86□□□□□ -0.99
CAPN3-202ENST00000337571 ECDO95905 644 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-202ENST00000337571 GYPAP02724 150 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 GYPBP06028 91 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 ANXA2P07355 339 aaKnown RBP8.86□□□□□ -0.99
CAPN3-202ENST00000337571 SLC2A1P11166 492 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 ZNF3P17036 446 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 OTX1P32242 354 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-202ENST00000337571 SLC25A1P53007 311 aa8.86□□□□□ -0.99
CAPN3-202ENST00000337571 CRMP1Q14194 572 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms