RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ZNF385CQ66K41 422 aaPredicted RBP11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 JMJD6Q6NYC1 403 aaPredicted RBP11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 GLIPR1L1Q6UWM5 242 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 KCTD9Q7L273 389 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 ST8SIA2Q92186 375 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 CRB3Q9BUF7 120 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 LPAR5Q9H1C0 372 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 MYOZ1Q9NP98 299 aaPredicted RBP11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 FANCFQ9NPI8 374 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 U3KQA8 63 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 RNF222A6NCQ9 220 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 TMEM14DPA8MWL7 114 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 NUPL2O15504 423 aaKnown RBP11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 HPP00738 406 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 FGF2P09038 288 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 RAB12Q6IQ22 244 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 LYG2Q86SG7 212 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 BVESQ8NE79 360 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 NOXO1Q8NFA2 376 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 OR10R2Q8NGX6 335 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 PRRT1Q99946 306 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 PNRC2Q9NPJ4 139 aaKnown RBP11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 SDHAF3Q9NRP4 125 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 MED9Q9NWA0 146 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 PRR13Q9NZ81 148 aa11.87□□□□□ -0.51
TUBA1B-201ENST00000332858 IGHV5-10-1A0A0J9YXX1 117 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 EFSO43281 561 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 RAD51DO75771 328 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 MPIG6BO95866 241 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 QDPRP09417 244 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 LUMP51884 338 aaPredicted RBP11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 TMEM50BP56557 158 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 C11orf87Q6NUJ2 197 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 FAM219AQ8IW50 185 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 ZBTB44Q8NCP5 570 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 OR2M3Q8NG83 312 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 MARCH1Q8TCQ1 289 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 RASL10BQ96S79 203 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 SHARPINQ9H0F6 387 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 SLC2A8Q9NY64 477 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 PFDN2Q9UHV9 154 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 TNFSF18Q9UNG2 199 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 TSPAN4O14817 238 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 IGHG1P01857 330 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 CASRP41180 1078 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 GABREP78334 506 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 MEF2DQ14814 521 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 ZMYND11Q15326 602 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 SLC25A53Q5H9E4 307 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 OR5D18Q8NGL1 313 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 VRK1Q99986 396 aaPredicted RBP11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 UQCC2Q9BRT2 126 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 OCIAD1Q9NX40 245 aa11.86□□□□□ -0.51
TUBA1B-201ENST00000332858 IGKV1-9A0A0C4DH69 117 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 EEF1E1-BLOC1S5C9J1V9 151 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ZNF878C9JN71 531 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ZFAND5O76080 213 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ZNF20P17024 532 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ACY1Q03154 408 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 SLC25A47Q6Q0C1 308 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 TMPPEQ6ZT21 453 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 FAM57BQ71RH2 274 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 HDDC2Q7Z4H3 204 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 SPEM1Q8N4L4 309 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 BOLLQ8N9W6 283 aaKnown RBP11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 OR2AJ1Q8NGZ0 328 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ZNF107Q9UII5 783 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 RARRES3Q9UL19 164 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 MRPS17Q9Y2R5 130 aaKnown RBP11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 B3GALT1Q9Y5Z6 326 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 K7ESF4 209 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 MASP2O00187 686 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 SNAPC5O75971 98 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 MGMTP16455 207 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 PI3P19957 117 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ARHGDIBP52566 201 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 GPR85P60893 370 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 MICBQ29980 383 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ATRAIDQ6UW56 229 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 OR5L2Q8NGL0 311 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 NPRL2Q8WTW4 380 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 EDAQ92838 391 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 LIN37Q96GY3 246 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 TMEM41AQ96HV5 264 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 GPN3Q9UHW5 284 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 MRPS28Q9Y2Q9 187 aaKnown RBP11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 SIGLEC6O43699 453 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 IL2RAP01589 272 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 STARD6P59095 220 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 KCNRGQ8N5I3 272 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 SPERTQ8NA61 448 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 ROBO4Q8WZ75 1007 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 PPA2Q9H2U2 334 aa11.85□□□□□ -0.51
TUBA1B-201ENST00000332858 IGHV3-15A0A0B4J1V0 119 aa11.84□□□□□ -0.51
TUBA1B-201ENST00000332858 G3V3Y1 287 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms