RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZIC4Q8N9L1 334 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 PCNPQ8WW12 178 aaKnown RBP15.34■□□□□ 0.05
DDX28-201ENST00000332395 FAM46BQ96A09 425 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 NABP1Q96AH0 204 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 WIPF3A6NGB9 483 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 M0R296 226 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 RAB3DO95716 219 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 CYB5AP00167 134 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 JMJD7P0C870 316 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 ENDOGQ14249 297 aaKnown RBP15.34■□□□□ 0.05
DDX28-201ENST00000332395 GFOD2Q3B7J2 385 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 ACER2Q5QJU3 275 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 AWAT2Q6E213 333 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 H3F3CQ6NXT2 135 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 BEST3Q8N1M1 668 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 GJC3Q8NFK1 279 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 OR14L1PQ8NHC6 308 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 AQP3Q92482 292 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 CHIAQ9BZP6 476 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 FOXD3Q9UJU5 478 aaPredicted RBP15.34■□□□□ 0.05
DDX28-201ENST00000332395 KLK13Q9UKR3 277 aa15.34■□□□□ 0.05
DDX28-201ENST00000332395 PCSK5Q92824 1860 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 SMAD9O15198 467 aaKnown RBP15.33■□□□□ 0.04
DDX28-201ENST00000332395 DHHO43323 396 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 TOXO94900 526 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 CFDP00746 253 aaPredicted RBP15.33■□□□□ 0.04
DDX28-201ENST00000332395 CTSSP25774 331 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 RAB14P61106 215 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 PGAP1Q75T13 922 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 DOK3Q7L591 496 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 OR5AS1Q8N127 324 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 RBPMSQ93062 196 aaKnown RBP15.33■□□□□ 0.04
DDX28-201ENST00000332395 SPACA5Q96QH8 159 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 RBM24Q9BX46 236 aaKnown RBP15.33■□□□□ 0.04
DDX28-201ENST00000332395 P4HTMQ9NXG6 502 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 FREM2Q5SZK8 3169 aa15.33■□□□□ 0.04
DDX28-201ENST00000332395 NCOA6Q14686 2063 aaPredicted RBP15.33■□□□□ 0.04
DDX28-201ENST00000332395 M0QYG6 137 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 DNPH1O43598 174 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 SERPINA7P05543 415 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 RAC3P60763 192 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 ZNF260Q3ZCT1 412 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 FAM122CQ6P4D5 195 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 RNF144BQ7Z419 303 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 ANGPTL5Q86XS5 388 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 CDH26Q8IXH8 852 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 GALNT16Q8N428 558 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 LRRC18Q8N456 261 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 PNPLA2Q96AD5 504 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 CMBLQ96DG6 245 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 DDA1Q9BW61 102 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 TINAGL1Q9GZM7 467 aaPredicted RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 PPA2Q9H2U2 334 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 EXO5Q9H790 373 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 PIPOXQ9P0Z9 390 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 ZNF107Q9UII5 783 aaPredicted RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 MAB21L2Q9Y586 359 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 UBE2QL1A1L167 161 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 TUBAL3A6NHL2 446 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 LRRC3CA6NJW4 275 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 E9PLN8 166 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 TSPAN9O75954 239 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 HOXD4P09016 255 aaPredicted RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 GIPP09681 153 aaPredicted RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 RFPL3SP0C7P2 107 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 ATF4P18848 351 aaPredicted RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 SUCLG1P53597 346 aaKnown RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 ZNF528Q3MIS6 628 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 KCNE4Q8WWG9 221 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 SF3B5Q9BWJ5 86 aaKnown RBP15.32■□□□□ 0.04
DDX28-201ENST00000332395 GSX2Q9BZM3 304 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 ULBP2Q9BZM5 246 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 SPRY4Q9C004 299 aa15.32■□□□□ 0.04
DDX28-201ENST00000332395 NCKAP5O14513 1909 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 TMEM14DPA8MWL7 114 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 ZNF736B4DX44 427 aaPredicted RBP15.31■□□□□ 0.04
DDX28-201ENST00000332395 C9orf172C9J069 976 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 AMY2AP04746 511 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 ITGB2P05107 769 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 CHMP1BQ7LBR1 199 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 GGNQ86UU5 652 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 NAA40Q86UY6 237 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 ZNF584Q8IVC4 421 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 CHST4Q8NCG5 386 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 SLC39A7Q92504 469 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 INTS12Q96CB8 462 aaKnown RBP15.31■□□□□ 0.04
DDX28-201ENST00000332395 PGAM5Q96HS1 289 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 FBLN5Q9UBX5 448 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 C5orf63A6NC05 138 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 OR5H15A6NDH6 313 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 F5H5K5 113 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 CD74P04233 296 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 MELTFP08582 738 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 CYB561P49447 251 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 HIST1H3AP68431 136 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 HIST2H3PS2Q5TEC6 136 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 HIST2H3AQ71DI3 136 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 FJX1Q86VR8 437 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 C20orf196Q8IYI0 205 aa15.31■□□□□ 0.04
DDX28-201ENST00000332395 ZNF101Q8IZC7 436 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms