RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 HIST1H2BKO60814 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BJP06899 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BOP23527 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BBP33778 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 CAMLGP49069 296 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BDP58876 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BCP62807 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 RNF4P78317 190 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 NKX6-1P78426 367 aaPredicted RBP21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST2H2BEQ16778 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 KHDC3LQ587J8 217 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.7■■□□□ 1.07
SOX1-201ENST00000330949 SPNS3Q6ZMD2 512 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 SLC35D2Q76EJ3 337 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 FAM219AQ8IW50 185 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 FOXRED2Q8IWF2 684 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BHQ93079 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BNQ99877 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HIST1H2BMQ99879 126 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 SLC2A4RGQ9NR83 387 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 PRR13Q9NZ81 148 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 SERGEFQ9UGK8 458 aa21.7■■□□□ 1.07
SOX1-201ENST00000330949 HEATR5AQ86XA9 2040 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 EDDM13A0A1B0GTR0 161 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 MKRN2OSH3BPM6 223 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 GUSBP08236 651 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 TMEM33P57088 247 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 SOHLH1Q5JUK2 328 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 RPUSD3Q6P087 351 aaKnown RBP21.7■■□□□ 1.06
SOX1-201ENST00000330949 LIPHQ8WWY8 451 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 PUS1Q9Y606 427 aaKnown RBP eCLIP21.7■■□□□ 1.06
SOX1-201ENST00000330949 IGKV1D-42A0A075B6H8 117 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 CT62P0C5K7 136 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 SEC11BP0C7V7 166 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 ATXN8OSP0DMR3 200 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 FCARP24071 287 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 CEACAM6P40199 344 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 NPY4RP50391 375 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 SUPT4H1P63272 117 aaKnown RBP21.7■■□□□ 1.06
SOX1-201ENST00000330949 OR13C3Q8NGS6 347 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 GDE1Q9NZC3 331 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 HHLA2Q9UM44 414 aa21.7■■□□□ 1.06
SOX1-201ENST00000330949 HLA-DQA2P01906 255 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 OR13C7P0DN81 318 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 ZNF10P21506 573 aaPredicted RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 UBE2V2Q15819 145 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 USF2Q15853 346 aaPredicted RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 ZNF141Q15928 474 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 SLC18B1Q6NT16 456 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 ZNF761Q86XN6 746 aaPredicted RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 SLC25A43Q8WUT9 341 aaPredicted RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 NTNG2Q96CW9 530 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 FBXO7Q9Y3I1 522 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 PTPRSQ13332 1948 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 PTBP3O95758 552 aaKnown RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 GPR75O95800 540 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 SOD3P08294 240 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 GNB3P16520 340 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 ZNF708P17019 499 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 MGAT2Q10469 447 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 ZNHIT3Q15649 155 aaPredicted RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 SHISA5Q8N114 240 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 SNIP1Q8TAD8 396 aaKnown RBP21.69■■□□□ 1.06
SOX1-201ENST00000330949 MOGAT1Q96PD6 335 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 TSPAN32Q96QS1 320 aa21.69■■□□□ 1.06
SOX1-201ENST00000330949 CSTAP01040 98 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 SFTPBP07988 381 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 IFI6P09912 130 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 FPR2P25090 351 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 CLDN6P56747 220 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 MFGE8Q08431 387 aaPredicted RBP21.68■■□□□ 1.06
SOX1-201ENST00000330949 VAX1Q5SQQ9 334 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 KCTD18Q6PI47 426 aaPredicted RBP21.68■■□□□ 1.06
SOX1-201ENST00000330949 CATSPERDQ86XM0 798 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 OR5R1Q8NH85 324 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 SOX7Q9BT81 388 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 SMDT1Q9H4I9 107 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.68■■□□□ 1.06
SOX1-201ENST00000330949 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.68■■□□□ 1.06
SOX1-201ENST00000330949 IGKV1D-16P01601 117 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 SLC35A1P78382 337 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 PSG6Q00889 435 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 ENPP2Q13822 863 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 OR52R1Q8NGF1 315 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 OR13C9Q8NGT0 318 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 HOXB13Q92826 284 aaPredicted RBP21.68■■□□□ 1.06
SOX1-201ENST00000330949 CCNL2Q96S94 520 aaPredicted RBP21.68■■□□□ 1.06
SOX1-201ENST00000330949 C19orf12Q9NSK7 152 aa21.68■■□□□ 1.06
SOX1-201ENST00000330949 ZNF724A8MTY0 619 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SYT7O43581 403 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 TIMP1P01033 207 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SMIM10L1P0DMW3 83 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 CXCR1P25024 350 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 ROM1Q03395 351 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SUMF2Q8NBJ7 301 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 LFNGQ8NES3 379 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 OR13D1Q8NGV5 346 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 RAB24Q969Q5 203 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SMIM10Q96HG1 83 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SMIM3Q9BZL3 60 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms