RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 NAA10P41227 235 aaPredicted RBP23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 GABPB1Q06547 395 aaPredicted RBP23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 ZMYND11Q15326 602 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 FAHD2BQ6P2I3 314 aaPredicted RBP23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 MUC20Q8N307 709 aaPredicted RBP23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 OR52H1Q8NGJ2 320 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 ERGIC1Q969X5 290 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 FAHD2AQ96GK7 314 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 S100A14Q9HCY8 104 aa23.25■■□□□ 1.31
ATPAF1-201ENST00000329231 IGHV3-64DA0A0J9YX35 117 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 PNPP00491 289 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 DDOSTP39656 456 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 ZNF121P58317 390 aaPredicted RBP23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 MAB21L1Q13394 359 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 TIGD6Q17RP2 521 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 LCN1P1Q5VSP4 162 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 C1orf87Q8N0U7 546 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 G6PC2Q9NQR9 355 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 DNAJC27Q9NZQ0 273 aa23.24■■□□□ 1.31
ATPAF1-201ENST00000329231 A0A0G2JMP0 313 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 A0A0X1KG70 313 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 CYB5R3P00387 301 aaPredicted RBP23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 CFL1P23528 166 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 FAM57BQ71RH2 274 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 SLC16A9Q7RTY1 509 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 PRSS45Q7RTY3 260 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 OR4M2Q8NGB6 313 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 OR56B2PQ8NGI1 322 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 TEAD3Q99594 435 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 RBM4BQ9BQ04 359 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 ADAT1Q9BUB4 502 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 OR10A2Q9H208 303 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 PATZ1Q9HBE1 687 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 LAMP5Q9UJQ1 280 aa23.23■■□□□ 1.31
ATPAF1-201ENST00000329231 SVEP1Q4LDE5 3571 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 PRKYO43930 277 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 FOXH1O75593 365 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 IRF2P14316 349 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 SLX4IPQ5VYV7 408 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 KLBQ86Z14 1044 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 TEX29Q8N6K0 151 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 SPERTQ8NA61 448 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 OR11L1Q8NGX0 322 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 Q8TCH9 128 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 SGK3Q96BR1 496 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 REEP6Q96HR9 211 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 CIB1Q99828 191 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 YIPF3Q9GZM5 350 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 NIPAL2Q9H841 368 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 ATRQ13535 2644 aa23.22■■□□□ 1.31
ATPAF1-201ENST00000329231 ZAR1LA6NP61 321 aa23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 GATA3P23771 443 aa23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 LCN2P80188 198 aa23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 PGAM5Q96HS1 289 aa23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 RGCCQ9H4X1 137 aa23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 BRD7Q9NPI1 651 aa23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 H2AFY2Q9P0M6 372 aaPredicted RBP23.21■■□□□ 1.31
ATPAF1-201ENST00000329231 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 CCDC182A6NF36 153 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 ANKRD30BLA7E2S9 258 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 J3QLI3 93 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 PHF1O43189 567 aaPredicted RBP23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 FSTL3O95633 263 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 ALOX5APP20292 161 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 CPT2P23786 658 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 EPHA2P29317 976 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 PMELP40967 661 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 FAM3AP98173 230 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 MZT1Q08AG7 82 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 ZSCAN26Q16670 478 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 DCAF12L2Q5VW00 463 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 PLPP7Q8NBV4 271 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 KLHDC2Q9Y2U9 406 aa23.2■■□□□ 1.3
ATPAF1-201ENST00000329231 PRAMEF6Q5VXH4 476 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 C12orf73Q69YU5 71 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 KCTD18Q6PI47 426 aaPredicted RBP23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 LRRN1Q6UXK5 716 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 KRT77Q7Z794 578 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 TCEANCQ8N8B7 351 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 TMEM158Q8WZ71 300 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 FN3KRPQ9HA64 309 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 TMEM165Q9HC07 324 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 UFSP2Q9NUQ7 469 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 METRNQ9UJH8 293 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 TMEM14AQ9Y6G1 99 aa23.19■■□□□ 1.3
ATPAF1-201ENST00000329231 PPIAL4EA0A075B759 164 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 PPIAL4CA0A0B4J2A2 164 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 CEACAM18A8MTB9 384 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 RNF212BA8MTL3 300 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 F5H0A9 414 aaPredicted RBP23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 PPIAL4DF5H284 164 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 ZNF205O95201 554 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 PTBP3O95758 552 aaKnown RBP23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 MRPL3P09001 348 aaKnown RBP23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 PPIAL4FP0DN26 164 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 EFNB1P98172 346 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 SCGB2A2Q13296 93 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 MPPED2Q15777 294 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 GFOD2Q3B7J2 385 aa23.18■■□□□ 1.3
ATPAF1-201ENST00000329231 TMEM163Q8TC26 289 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms