RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SEMA6DQ8NFY4 1073 aa13.22□□□□□ -0.29
TCOF1-201ENST00000323668 OR13C8Q8NGS7 320 aa13.22□□□□□ -0.29
TCOF1-201ENST00000323668 SECTM1Q8WVN6 248 aa13.22□□□□□ -0.29
TCOF1-201ENST00000323668 SOSTQ9BQB4 213 aa13.22□□□□□ -0.29
TCOF1-201ENST00000323668 FAM186AA6NE01 2351 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 ZNF354AO60765 605 aaPredicted RBP13.21□□□□□ -0.29
TCOF1-201ENST00000323668 VAMP5O95183 116 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 DUS4LO95620 317 aaKnown RBP13.21□□□□□ -0.29
TCOF1-201ENST00000323668 SKP2Q13309 424 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 ZNF266Q14584 549 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 DMRTC1Q5HYR2 192 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 SEZ6L2Q6UXD5 910 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 GHRLQ9UBU3 117 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 ANKUB1A6NFN9 424 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 PLPP3O14495 311 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 GPR137BO60478 399 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 ADAM5Q6NVV9 412 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 GPX8Q8TED1 209 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 ZNF75AQ96N20 296 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 OXGR1Q96P68 337 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 PAPOLGQ9BWT3 736 aaKnown RBP13.21□□□□□ -0.29
TCOF1-201ENST00000323668 CNTD2Q9H8S5 307 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 KLHDC2Q9Y2U9 406 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 FLVCR1Q9Y5Y0 555 aa13.21□□□□□ -0.29
TCOF1-201ENST00000323668 ZIC2O95409 532 aaPredicted RBP13.21□□□□□ -0.3
TCOF1-201ENST00000323668 UBE2KP61086 200 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 NKX6-1P78426 367 aaPredicted RBP13.21□□□□□ -0.3
TCOF1-201ENST00000323668 BPHLQ86WA6 291 aaPredicted RBP13.21□□□□□ -0.3
TCOF1-201ENST00000323668 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 CLEC1AQ8NC01 280 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 OR52N4Q8NGI2 321 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 OR51A2Q8NGJ7 313 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 ASB5Q8WWX0 329 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 MARVELD3Q96A59 401 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 CHST6Q9GZX3 395 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 ALX4Q9H161 411 aaPredicted RBP13.21□□□□□ -0.3
TCOF1-201ENST00000323668 BRWD1Q9NSI6 2320 aa13.21□□□□□ -0.3
TCOF1-201ENST00000323668 NMBP08949 121 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 CD79AP11912 226 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
TCOF1-201ENST00000323668 UNQ9370/PRO34162Q6UXP9 181 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 MAML2Q8IZL2 1156 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-201ENST00000323668 SLC30A7Q8NEW0 376 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 BCO1Q9HAY6 547 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-201ENST00000323668 CD300LBA8K4G0 201 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 M0R135 149 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 SMIM10L1P0DMW3 83 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 VSIG10L2P0DP72 767 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 POU3F2P20265 443 aaPredicted RBP13.2□□□□□ -0.3
TCOF1-201ENST00000323668 ZNF799Q96GE5 643 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 SMIM10Q96HG1 83 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 GPR173Q9NS66 373 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 PRELID3BQ9Y3B1 194 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 SIGLEC6O43699 453 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 IGF2P01344 180 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 OR5H8P0DN80 308 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 SSR4P51571 173 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 F2RL1P55085 397 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 OR1S2Q8NGQ3 325 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 MFRPQ9BY79 579 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 AICDAQ9GZX7 198 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 PLEKHA2Q9HB19 425 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 RHOFQ9HBH0 211 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 C5orf67F2Z3F1 127 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 TRAPPC2LH3BP13 241 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 SLC34A2O95436 690 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 NGFRP08138 427 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 OPRM1P35372 400 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 TAF9Q16594 264 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 IL1F10Q8WWZ1 152 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 VN1R1Q9GZP7 353 aa13.2□□□□□ -0.3
TCOF1-201ENST00000323668 RAB19A4D1S5 217 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 PLPP5Q8NEB5 264 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
TCOF1-201ENST00000323668 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 NME1P15531 152 aaKnown RBP13.19□□□□□ -0.3
TCOF1-201ENST00000323668 CDAP32320 146 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 ALDH3B1P43353 468 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 FASLGP48023 281 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 RBP2P50120 134 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 SLC22A25Q6T423 547 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 TMPPEQ6ZT21 453 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 OR4D10Q8NGI6 311 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 OR5L1Q8NGL2 311 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 ST7LQ8TDW4 575 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 C8orf44Q96CB5 159 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 RP1P56715 2156 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 A0A0G2JK05 382 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 SERPINE3A8MV23 424 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 TRIM77I1YAP6 450 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 EFEMP2O95967 443 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 HIST1H1DP16402 221 aaKnown RBP13.19□□□□□ -0.3
TCOF1-201ENST00000323668 CSF2RBP32927 897 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 SLC37A1P57057 533 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms