RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 HBA1P69905 142 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CTF1Q16619 201 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF628Q5EBL2 1059 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ADTRPQ96IZ2 230 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 MYOFQ9NZM1 2061 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 RGPD4Q7Z3J3 1758 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 FBLL1A6NHQ2 334 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 STATHP02808 62 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 SSR4P51571 173 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CNN1P51911 297 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ATOH8Q96SQ7 321 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 SLC30A3Q99726 388 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 GABARAPL1Q9H0R8 117 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 NECAP2Q9NVZ3 263 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 F11P03951 625 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 NOVP48745 357 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 DUSP8Q13202 625 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 OR7A5Q15622 319 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 RAB6CQ53S08 254 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM64Q6YI46 380 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 LSRQ86X29 649 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CRYGNQ8WXF5 182 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 BCORQ6W2J9 1755 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 MRPL33O75394 65 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CA1P00915 261 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 FUCA1P04066 466 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 DCAF12Q5T6F0 453 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 NSUN5P2Q63ZY6 315 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM71Q6P5X7 295 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 POC1AQ8NBT0 407 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 GJC3Q8NFK1 279 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 LRRC29Q8WV35 223 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 BOD1Q96IK1 185 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ATF6BQ99941 703 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CTSFQ9UBX1 484 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 NCOR1O75376 2440 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CD70P32970 193 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 THBS4P35443 961 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 LGI3Q8N145 548 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 MAFAQ8NHW3 353 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 KLF16Q9BXK1 252 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 OBP2AQ9NY56 170 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 SPINT2O43291 252 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 FAM87AP0C7U9 286 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 ROM1Q03395 351 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 FAM71E1Q6IPT2 247 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 CCDC190Q86UF4 302 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF48Q96MX3 618 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 DDOQ99489 341 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PSG11Q9UQ72 335 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 DOCK5Q9H7D0 1870 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM129A0AVI4 362 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 FAM74A7A6NL05 159 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 ALG1L2C9J202 215 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 DIRC3C9JPN6 131 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 H3BSH0 61 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 XRCC2O43543 280 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 NNATQ16517 81 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 C11orf54Q9H0W9 315 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 FLRT3Q9NZU0 649 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 KCND3Q9UK17 655 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 KCNK7Q9Y2U2 307 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 OR4C46A6NHA9 309 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 RPS27LQ71UM5 84 aaKnown RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 HMGN2P46Q86SG4 172 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 METTL27Q8N6F8 245 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 ADAT3Q96EY9 351 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 OR8B4Q96RC9 309 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 EGLN1Q9GZT9 426 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 LOC390937A0A1W2PQ73 354 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 COX5AP20674 150 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 KDM4DQ6B0I6 523 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF583Q96ND8 569 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 OSGIN1Q9UJX0 560 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 NDRG4Q9ULP0 352 aaKnown RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PI4KAP42356 2102 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 AGBL5Q8NDL9 886 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 CSNK1G3Q9Y6M4 447 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 RPS26P11Q5JNZ5 115 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 DMRTA1Q5VZB9 504 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM178AQ8NBL3 297 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 WDR83Q9BRX9 315 aaKnown RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 SLC26A1Q9H2B4 701 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 A0A1W2PNV4 684 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 YIF1AO95070 293 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 GDNFP39905 211 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PIWIL3Q7Z3Z3 882 aaKnown RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 FER1L6-AS2Q96M78 137 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 GUSBP08236 651 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 NPSR1Q6W5P4 371 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 BHLHA15Q7RTS1 189 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 RAB1CQ92928 201 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 TSACCQ96A04 125 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 NKX6-3A6NJ46 265 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PJVKQ0ZLH3 352 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 TP53I3Q53FA7 332 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms