RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ZNF28P17035 718 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 PPT1P50897 306 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 TGIF1Q15583 401 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 FIP1L1Q6UN15 594 aaKnown RBP13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 OR13C8Q8NGS7 320 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 GPX8Q8TED1 209 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 CCDC107Q8WV48 283 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 SEH1LQ96EE3 360 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 PPP4R1LQ9P1A2 415 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 LRP12Q9Y561 859 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 TRBV5-5A0A0J9YX44 114 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 HEXAP06865 529 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF735P0CB33 412 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 KLK2P20151 261 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 GLO1Q04760 184 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 PGAP1Q75T13 922 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 NUP54Q7Z3B4 507 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF227Q86WZ6 799 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 JAGN1Q8N5M9 183 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF441Q8N8Z8 693 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ELP5Q8TE02 316 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ASB13Q8WXK3 278 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ZBTB8AQ96BR9 441 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 OR8B4Q96RC9 309 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 MICU1Q9BPX6 476 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 NAA11Q9BSU3 229 aaPredicted RBP13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 SEC11CQ9BY50 192 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 TTC28Q96AY4 2481 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 FOSL2P15408 326 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 SRSF4Q08170 494 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 PEA15Q15121 130 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 NUBPLQ8TB37 319 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 PIK3IP1Q96FE7 263 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 JSRP1Q96MG2 331 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC6A7Q99884 636 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 ATG5Q9H1Y0 275 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 TAS2R4Q9NYW5 299 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 VSIG4Q9Y279 399 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM212A6NML5 194 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 S100A9P06702 114 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC2A1P11166 492 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 MUC1P15941 1255 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 EPHA8P29322 1005 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 BIDP55957 195 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 NKPD1Q17RQ9 610 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 TMPPEQ6ZT21 453 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF679Q8IYX0 411 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 OR4S1Q8NGB4 309 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF519Q8TB69 540 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 ARL11Q969Q4 196 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 CCNL2Q96S94 520 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM100Q9NV29 134 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 DHDHQ9UQ10 334 aa13.82□□□□□ -0.2
SHROOM1-201ENST00000319854 IGLV1-36A0A0B4J1U3 117 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 A0A0B4J2A0 478 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 TTLL8A6PVC2 850 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 EEF1E1-BLOC1S5C9J1V9 151 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 MS4A18H0YCH9 400 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 YKT6O15498 198 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 NPIPB7O75200 414 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 DXOO77932 396 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 MT-ATP6P00846 226 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 IGHV2-70P01814 119 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 FAM157CP0CG43 387 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 CDAP32320 146 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 RIDAP52758 137 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 EIF2S3LQ2VIR3 472 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 MS4A18Q3C1V0 323 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF627Q7L945 461 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 PLPP5Q8NEB5 264 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 TMEM234Q8WY98 164 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 CLCC1Q96S66 551 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 CDX2Q99626 313 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 HRH4Q9H3N8 390 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 SEBOXQ9HB31 216 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 SHPKQ9UHJ6 478 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 A0A1W2PQD3 144 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 PMS2P1A4D2B8 440 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 C9JQL5 133 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 TXNL1O43396 289 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 CD74P04233 296 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 SLC26A5P58743 744 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 ACY1Q03154 408 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 C17orf67Q0P5P2 114 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 NKAPLQ5M9Q1 402 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 ACER2Q5QJU3 275 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 CD163Q86VB7 1156 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 PPP1R3BQ86XI6 285 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 RRNAD1Q96FB5 475 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 ZC3H10Q96K80 434 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 OR5B2Q96R09 309 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 NRIP2Q9BQI9 281 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 PCED1AQ9H1Q7 454 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 OR51M1Q9H341 326 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 RCC2Q9P258 522 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 POLR1DQ9Y2S0 133 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 NUP210LQ5VU65 1888 aa13.81□□□□□ -0.2
SHROOM1-201ENST00000319854 EML6Q6ZMW3 1958 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms