RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 HIST1H1CP16403 213 aaKnown RBP11.83□□□□□ -0.52
RPP40-201ENST00000319533 OMGP23515 440 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 CD200P41217 278 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 FGF12P61328 243 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 COX10Q12887 443 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 PPP1R8Q12972 351 aaKnown RBP11.83□□□□□ -0.52
RPP40-201ENST00000319533 ZNF770Q6IQ21 691 aaPredicted RBP11.83□□□□□ -0.52
RPP40-201ENST00000319533 LYPD2Q6UXB3 125 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 RASSF6Q6ZTQ3 369 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 ADGRG5Q8IZF4 528 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 OR10G2Q8NGC3 310 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 OR4F5Q8NH21 305 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 CITED1Q99966 193 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 CDADC1Q9BWV3 514 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 BEX1Q9HBH7 125 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
RPP40-201ENST00000319533 RPRD1BQ9NQG5 326 aaKnown RBP11.83□□□□□ -0.52
RPP40-201ENST00000319533 TBC1D23Q9NUY8 699 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 C22orf46C9J442 243 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 H3BNX3 289 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 DCTN6O00399 190 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 TNFRSF13BO14836 293 aaPredicted RBP11.82□□□□□ -0.52
RPP40-201ENST00000319533 PTBP3O95758 552 aaKnown RBP11.82□□□□□ -0.52
RPP40-201ENST00000319533 KNG1P01042 644 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 NPY4RP50391 375 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 RELBQ01201 579 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.82□□□□□ -0.52
RPP40-201ENST00000319533 MIDNQ504T8 468 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 SLC35F1Q5T1Q4 408 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.82□□□□□ -0.52
RPP40-201ENST00000319533 BHLHE23Q8NDY6 225 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 SDR9C7Q8NEX9 313 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 CANT1Q8WVQ1 401 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 SLCO4A1Q96BD0 722 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 TSSK2Q96PF2 358 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 HCAR1Q9BXC0 346 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 DGCR6LQ9BY27 220 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 VNN3Q9NY84 501 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 IL20Q9NYY1 176 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 C1RLQ9NZP8 487 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 PDP1Q9P0J1 537 aaPredicted RBP11.82□□□□□ -0.52
RPP40-201ENST00000319533 B9D1Q9UPM9 204 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 BAIAP2Q9UQB8 552 aa11.82□□□□□ -0.52
RPP40-201ENST00000319533 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 P2RY10O00398 339 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 ENSAO43768 121 aaKnown RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 E2F6O75461 281 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 ATP6V1G2O95670 118 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 HLA-DQA2P01906 255 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 HLA-DPB1P04440 258 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 LIPFP07098 398 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 MELTFP08582 738 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 IRF2P14316 349 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 MMP9P14780 707 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 CFHR2P36980 270 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 RAG2P55895 527 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 SRSF4Q08170 494 aaKnown RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 GK2Q14410 553 aaPredicted RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 MEP1BQ16820 701 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 SLC36A3Q495N2 470 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 OLFML2AQ68BL7 652 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 SLC18B1Q6NT16 456 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 CORO6Q6QEF8 472 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 FIP1L1Q6UN15 594 aaKnown RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 OR6V1Q8N148 313 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 SLC26A10Q8NG04 563 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 OR2T33Q8NG76 320 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 GIPC3Q8TF64 312 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 FAM71F1Q96KD3 344 aaPredicted RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 TSSK6Q9BXA6 273 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 CHIAQ9BZP6 476 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 WDR76Q9H967 626 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 NKX1-2Q9UD57 310 aaPredicted RBP11.81□□□□□ -0.52
RPP40-201ENST00000319533 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
RPP40-201ENST00000319533 CLPSL1A2RUU4 121 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 OR6C68A6NDL8 312 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 ZNF879B4DU55 563 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 BHLHE40O14503 412 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 FAM20BO75063 409 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 SOX14O95416 240 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 IFNGP01579 166 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 ECH1Q13011 328 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 CD276Q5ZPR3 534 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 C17orf107Q6ZR85 190 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 RHOUQ7L0Q8 258 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 ZBTB46Q86UZ6 589 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 PROKR2Q8NFJ6 384 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 OR11L1Q8NGX0 322 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 OR2T4Q8NH00 348 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 TEX47Q8TBZ9 253 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
RPP40-201ENST00000319533 FN3KQ9H479 309 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms