RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ZNF260Q3ZCT1 412 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 UNQ6494/PRO21346Q6UXR6 183 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 Q6ZRG5 221 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 CD300LFQ8TDQ1 290 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 MITD1Q8WV92 249 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 ERGIC1Q969X5 290 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 ARHGAP5-AS1Q96IT6 56 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 SULT4A1Q9BR01 284 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 LYRM4Q9HD34 91 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 RCC2Q9P258 522 aaKnown RBP8.56□□□□□ -1.04
RPGR-201ENST00000318842 WNT16Q9UBV4 365 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 OR52A1Q9UKL2 312 aa8.56□□□□□ -1.04
RPGR-201ENST00000318842 A6NCN8 305 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 RNASEK-C17orf49H0YIS7 233 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 MBTPS2O43462 519 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 EMP2P54851 167 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 HHEXQ03014 270 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 RASGEF1BQ0VAM2 473 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 KIR2DS3Q14952 304 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 Q3ZCU0 254 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 SLC18B1Q6NT16 456 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 ZNF343Q6P1L6 599 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 LANCL3Q6ZV70 420 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 OR1M1Q8NGA1 313 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 MRPL48Q96GC5 212 aaKnown RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 WDR92Q96MX6 357 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 PLRG1O43660 514 aaKnown RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 APODP05090 189 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 ZNF10P21506 573 aaPredicted RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 ABCD3P28288 659 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 DHPSP49366 369 aaPredicted RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 RRADP55042 308 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 NFATC4Q14934 902 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 ZNF813Q6ZN06 617 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 CCDC36Q8IYA8 594 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 PTPMT1Q8WUK0 201 aaPredicted RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 LMF2Q9BU23 707 aaKnown RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 ABHD14AQ9BUJ0 271 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 ZNF275Q9NSD4 429 aaPredicted RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 ZNF701Q9NV72 531 aaPredicted RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 UPB1Q9UBR1 384 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 PCOLCE2Q9UKZ9 415 aa8.55□□□□□ -1.04
RPGR-201ENST00000318842 MUC22E2RYF6 1773 aaPredicted RBP8.55□□□□□ -1.04
RPGR-201ENST00000318842 IGLV1-36A0A0B4J1U3 117 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 CXorf51AA0A1B0GTR3 108 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 C2orf74A8MZ97 194 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 GPR89AB7ZAQ6 455 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 ST8SIA5O15466 376 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 CLN5O75503 358 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 CRTAPO75718 401 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 CD2P06729 351 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 GPR89BP0CG08 455 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 TPT1P13693 172 aaKnown RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 ZNF14P17017 642 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 KIR2DL1P43626 348 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 MPPED2Q15777 294 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 EIF2S3LQ2VIR3 472 aaKnown RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 AWAT1Q58HT5 328 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 GFI1BQ5VTD9 330 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 DHRS7BQ6IAN0 325 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 GLIPR1L1Q6UWM5 242 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 CATSPERDQ86XM0 798 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 HSD17B11Q8NBQ5 300 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 MFRPQ9BY79 579 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SLC19A3Q9BZV2 496 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 G6PC2Q9NQR9 355 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 LAMA5O15230 3695 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 GPR37O15354 613 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 RNF224P0DH78 156 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SSTP61278 116 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 HGFACQ04756 655 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 ARFRP1Q13795 201 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 C14orf28Q4W4Y0 310 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SLAMF9Q96A28 289 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 CMTM3Q96MX0 182 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 RARRES2Q99969 163 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 SPACA1Q9HBV2 294 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SLC2A8Q9NY64 477 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 LPAR3Q9UBY5 353 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 RHBDD3Q9Y3P4 386 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 KIAA2026Q5HYC2 2103 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 IGHV5-51A0A0C4DH38 117 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 A0A0J9YY10 115 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 PMS2P1A4D2B8 440 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 RAMP1O60894 148 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 APOC1P02654 83 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 OPRM1P35372 400 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 PPICP45877 212 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SLC25A1P53007 311 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 CCDC157Q569K6 752 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 ABHD12BQ7Z5M8 362 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 CPEB2Q7Z5Q1 589 aaKnown RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.54□□□□□ -1.04
RPGR-201ENST00000318842 SUMF1Q8NBK3 374 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 SLC22A18Q96BI1 424 aa8.54□□□□□ -1.04
RPGR-201ENST00000318842 EDEM2Q9BV94 578 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms