RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 MCHR2Q969V1 340 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PLCXD1Q9NUJ7 323 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 COPS3Q9UNS2 423 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 EP300Q09472 2414 aaPredicted RBP12.12□□□□□ -0.47
RFFL-201ENST00000315249 ARID1AO14497 2285 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PTTG1O95997 202 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PRR35P0CG20 571 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 PRPH2P23942 346 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 SMIM15Q7Z3B0 74 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 TPPP3Q9BW30 176 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 OR2B2Q9GZK3 357 aa12.12□□□□□ -0.47
RFFL-201ENST00000315249 GPR37O15354 613 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 PNLIPP16233 465 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 PAQR8Q8TEZ7 354 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 TM4SF19Q96DZ7 209 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 SBF1O95248 1867 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 A0A1W2PRD5 423 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 A0A1W2PRF3 423 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 A0A1W2PRM7 423 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 AIPO00170 330 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 CCL3P10147 92 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 PAQR6Q6TCH4 344 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 HYLS1Q96M11 299 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 A0A1B0GTH9 108 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 SBK3P0C264 359 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 CLINT1Q14677 625 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 GPNMBQ14956 572 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 NOXA1Q86UR1 476 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 PRSS35Q8N3Z0 413 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 MALSU1Q96EH3 234 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 CHRM2P08172 466 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 ZNF32P17041 273 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 EBPQ15125 230 aaKnown RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 PPP1CBP62140 327 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 HTD2P86397 168 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 SUN5Q8TC36 379 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 ZNF14P17017 642 aaPredicted RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 SERPINF1P36955 418 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 GK2Q14410 553 aaPredicted RBP12.11□□□□□ -0.47
RFFL-201ENST00000315249 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.11□□□□□ -0.47
RFFL-201ENST00000315249 PABPC1L2AQ5JQF8 200 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 PTOV1Q86YD1 416 aa12.11□□□□□ -0.47
RFFL-201ENST00000315249 H3BMH7 237 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 SRPXP78539 464 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 BTNL3Q6UXE8 466 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 PLPP5Q8NEB5 264 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 TMEM165Q9HC07 324 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 TMEM74BQ9NUR3 256 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 RER1O15258 196 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 ACTL6AO96019 429 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 CLEC2LP0C7M8 214 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 UBE2IP63279 158 aaKnown RBP12.1□□□□□ -0.47
RFFL-201ENST00000315249 LACC1Q8IV20 430 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 SLC25A45Q8N413 288 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 ZNF441Q8N8Z8 693 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 ZG16BQ96DA0 208 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
RFFL-201ENST00000315249 A0A1W2PS29 197 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 NPBWR1P48145 328 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 DLX5P56178 289 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 PMP22Q01453 160 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 PDCD1Q15116 288 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 CBLN3Q6UW01 205 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 NUBPLQ8TB37 319 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 GALMQ96C23 342 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 MMP25Q9NPA2 562 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 SDCBPO00560 298 aaPredicted RBP12.1□□□□□ -0.47
RFFL-201ENST00000315249 COX7A1P24310 79 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 TUSC5Q8IXB3 177 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 MBOAT4Q96T53 435 aa12.1□□□□□ -0.47
RFFL-201ENST00000315249 HRKO00198 91 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 APOC3P02656 99 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ALOX5APP20292 161 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 TAS2R30P59541 319 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 KLHDC8BQ8IXV7 354 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 C17orf78Q8N4C9 275 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 UBALD1Q8TB05 177 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ARL11Q969Q4 196 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 NANOGP1Q8N7R0 232 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 SLC38A9Q8NBW4 561 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 OR2AE1Q8NHA4 323 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 ISG20L2Q9H9L3 353 aaKnown RBP12.09□□□□□ -0.47
RFFL-201ENST00000315249 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
RFFL-201ENST00000315249 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
RFFL-201ENST00000315249 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
RFFL-201ENST00000315249 SORDQ00796 357 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms