RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 OR2A2Q6IF42 318 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 YIPF5Q969M3 257 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 PTX4Q96A99 478 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 ABHD17AQ96GS6 310 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 RGCCQ9H4X1 137 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 LHX6Q9UPM6 363 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 RHBDD3Q9Y3P4 386 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 CELSR3Q9NYQ7 3312 aa14.58□□□□□ -0.08
CLCF1-201ENST00000312438 LYRM1O43325 122 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 SSX4O60224 188 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 CTAG2O75638 210 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 IL18BPO95998 194 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 CD79AP11912 226 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 MAP2K3P46734 347 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 PTH2RP49190 550 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 RAB1AP62820 205 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 MRPS10P82664 201 aaKnown RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 PLA2G7Q13093 441 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 TMEM53Q6P2H8 277 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 OR5AS1Q8N127 324 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 SEMA6DQ8NFY4 1073 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 OR4D6Q8NGJ1 314 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 OR1K1Q8NGR3 316 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 SMIM4Q8WVI0 70 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 PHF21AQ96BD5 680 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 REEP6Q96HR9 211 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 NKX3-1Q99801 234 aaPredicted RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 RBFOX1Q9NWB1 397 aaKnown RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 LDLRAD4O15165 306 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 CNOT4O95628 575 aaKnown RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 EFNB2P52799 333 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 DGCR2P98153 550 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 ACSF3Q4G176 576 aaPredicted RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 NSUN5P2Q63ZY6 315 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 TFAP2EQ6VUC0 442 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 UTS2BQ765I0 119 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 BCL2L2Q92843 193 aaPredicted RBP14.57□□□□□ -0.08
CLCF1-201ENST00000312438 PPP1R14BQ96C90 147 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 GPR137Q96N19 417 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 NEDD4LQ96PU5 975 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 C1QTNF5Q9BXJ0 243 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 PIGLQ9Y2B2 252 aa14.57□□□□□ -0.08
CLCF1-201ENST00000312438 GABARAPH6UMI1 98 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 CD3GP09693 182 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 TMIGD3P0DMS9 266 aaPredicted RBP14.56□□□□□ -0.08
CLCF1-201ENST00000312438 GABRA1P14867 456 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 TAS2R20P59543 309 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 TGFBR3Q03167 851 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 PLP2Q04941 152 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 TBR1Q16650 682 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 KRTCAP3Q53RY4 240 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 ZNF585AQ6P3V2 769 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 COLCA1Q6ZS62 124 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 ANGPTL5Q86XS5 388 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 GCNT2Q8N0V5 402 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 TOMM5Q8N4H5 51 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 C9orf106Q8NAJ2 232 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 FCAMRQ8WWV6 532 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 NANOS1Q8WY41 292 aaKnown RBP14.56□□□□□ -0.08
CLCF1-201ENST00000312438 ZC3HAV1LQ96H79 300 aaKnown RBP14.56□□□□□ -0.08
CLCF1-201ENST00000312438 ATG5Q9H1Y0 275 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 DNAJC13O75165 2243 aa14.56□□□□□ -0.08
CLCF1-201ENST00000312438 NCOA6Q14686 2063 aaPredicted RBP14.55□□□□□ -0.08
CLCF1-201ENST00000312438 LOC100509620A0A075B734 347 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 IGKV1-9A0A0C4DH69 117 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 XRCC2O43543 280 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 HCKP08631 526 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 PRF1P14222 555 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 RAB6AP20340 208 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 STOMP27105 288 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 KIR2DL2P43627 348 aaPredicted RBP14.55□□□□□ -0.08
CLCF1-201ENST00000312438 RIPPLY1Q0D2K3 151 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 KRT74Q7RTS7 529 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 DUSP18Q8NEJ0 188 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 OR2AE1Q8NHA4 323 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 ENKURQ8TC29 256 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 CHST5Q9GZS9 411 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 B3GNT2Q9NY97 397 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 RAB22AQ9UL26 194 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 ZNF503-AS2A6NEH8 195 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 GGT3PA6NGU5 568 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 BPNT1O95861 308 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 FAHP16930 419 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 KIR2DL3P43628 341 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 CCDC36Q8IYA8 594 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 CADM3Q8N126 398 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 CNEP1R1Q8N9A8 125 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 OR6K3Q8NGY3 331 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 AKAP1Q92667 903 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLCF1-201ENST00000312438 KCNK15Q9H427 330 aa14.55□□□□□ -0.08
CLCF1-201ENST00000312438 A0A0A6YYH2 397 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 FAM240BA0A1B0GVZ2 78 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 CIB4A0PJX0 185 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 A6NJ64 397 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 CENPXA8MT69 81 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 ORC5O43913 435 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 GPR176Q14439 515 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 UBE2V2Q15819 145 aa14.54□□□□□ -0.08
CLCF1-201ENST00000312438 HIKESHIQ53FT3 197 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms