RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 WWTR1Q9GZV5 400 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 CRHP06850 196 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 ERVK-16P61578 105 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 IKZF1Q13422 519 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 ISXQ2M1V0 245 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 TMEM31Q5JXX7 168 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 CST9LP1Q5W188 147 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 COX14Q96I36 57 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 TXNDC12O95881 172 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 VN1R4Q7Z5H5 301 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 NPEPL1Q8NDH3 523 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 HINT2Q9BX68 163 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 TP53TG5Q9Y2B4 290 aa17.39■□□□□ 0.37
USP48-201ENST00000308271 GP1BAP07359 652 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 PIGPP57054 158 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 DEGS2Q6QHC5 323 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 Q7L0L9 218 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 LIN37Q96GY3 246 aaPredicted RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 MED29Q9NX70 200 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 KIR2DS1A0A191URI9 304 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 H0YIG0 161 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 FKBP2P26885 142 aaKnown RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 CALCRP30988 508 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 KIR2DS4P43632 304 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 AGFG1P52594 562 aaKnown RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 KIR2DS1Q14954 304 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 SLC16A13Q7RTY0 426 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 ZNF611Q8N823 705 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 RNF150Q9ULK6 438 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 FRG2CA6NGY1 282 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 CYB5BO43169 146 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 RBP2P50120 134 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 RAB32Q13637 225 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 TESK1Q15569 626 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 OR2A5Q96R48 311 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 CABLES2Q9BTV7 478 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 OPA3Q9H6K4 179 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 PATZ1Q9HBE1 687 aaKnown RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 GNG13Q9P2W3 67 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 TAF1LQ8IZX4 1826 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 PLSCR5A0PG75 271 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 C17orf112F2Z3M2 114 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 CD79AP11912 226 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 MSR1P21757 451 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 PNLIPRP2P54317 469 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 ZNF141Q15928 474 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 OR2T2Q6IF00 324 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 RGS7BPQ6MZT1 257 aaPredicted RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 ZFP62Q8NB50 900 aaPredicted RBP17.38■□□□□ 0.37
USP48-201ENST00000308271 TVP23CQ96ET8 276 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 FRRS1LQ9P0K9 344 aa17.38■□□□□ 0.37
USP48-201ENST00000308271 CYTIPO60759 359 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 PDLIM3Q53GG5 364 aaPredicted RBP17.37■□□□□ 0.37
USP48-201ENST00000308271 RXFP4Q8TDU9 374 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 TSLPQ969D9 159 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 SHARPINQ9H0F6 387 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 PLK3Q9H4B4 646 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 XRCC2O43543 280 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 BCKDHBP21953 392 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 OPRM1P35372 400 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 DUSP3P51452 185 aaPredicted RBP17.37■□□□□ 0.37
USP48-201ENST00000308271 MLF2Q15773 248 aaPredicted RBP17.37■□□□□ 0.37
USP48-201ENST00000308271 ANKRD33Q7Z3H0 272 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 ZNF610Q8N9Z0 462 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 OR4C45A6NMZ5 311 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 PRKNO60260 465 aaPredicted RBP17.37■□□□□ 0.37
USP48-201ENST00000308271 APLNRP35414 380 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 CATR1Q13166 79 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 TMEM268Q5VZI3 342 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 ZNF705AQ6ZN79 300 aaPredicted RBP17.37■□□□□ 0.37
USP48-201ENST00000308271 SUCNR1Q9BXA5 334 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 FLRT3Q9NZU0 649 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 C2orf72A6NCS6 295 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 CLDN1O95832 211 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 GLAP06280 429 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 IGSF11Q5DX21 431 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 AAED1Q7RTV5 226 aa17.37■□□□□ 0.37
USP48-201ENST00000308271 LRP5LA4QPB2 252 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 ZNF727A8MUV8 499 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 QDPRP09417 244 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 CLEC9AQ6UXN8 241 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 FAM24BQ8N5W8 94 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 SLC35B3Q9H1N7 401 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 FGF21Q9NSA1 209 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 PLRG1O43660 514 aaKnown RBP17.36■□□□□ 0.37
USP48-201ENST00000308271 CTSVO60911 334 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 CTXN2P0C2S0 81 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 HIST1H1DP16402 221 aaKnown RBP17.36■□□□□ 0.37
USP48-201ENST00000308271 KCNJ3P48549 501 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 ECH1Q13011 328 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 TSEN54Q7Z6J9 526 aaKnown RBP17.36■□□□□ 0.37
USP48-201ENST00000308271 TMEM123Q8N131 208 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 LOC105371267A0A1B0GV96 52 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 NHLRC3Q5JS37 347 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 CMBLQ96DG6 245 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 TSPAN32Q96QS1 320 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 NMES1Q9C002 83 aa17.36■□□□□ 0.37
USP48-201ENST00000308271 GPR173Q9NS66 373 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms