RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FABP1P07148 127 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 ISL1P61371 349 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 FAM26EQ8N5C1 309 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 SLC35E1Q96K37 410 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 CSF3RQ99062 836 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 SLC6A13Q9NSD5 602 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 B3GAT1Q9P2W7 334 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 SIT1Q9Y3P8 196 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 DOT1LQ8TEK3 1739 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 IGKV6-21A0A0C4DH24 114 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 GALR3O60755 368 aaPredicted RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 TBXA2RP21731 343 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 GALR1P47211 349 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 METAP1P53582 386 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 SLC37A1P57057 533 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 RHOFQ9HBH0 211 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 TTC3P53804 2025 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 KIR2DS5A0A0G2JLQ3 304 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 A0A0G2JNG1 304 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 KIR2DS3K7RE56 304 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 KIR2DS5Q14953 304 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 SLC37A2Q8TED4 501 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 MRPS24Q96EL2 167 aaKnown RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 DUS3LQ96G46 650 aaKnown RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 SIGLEC1Q9BZZ2 1709 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 PBOV1Q9GZY1 135 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 ENTPD2Q9Y5L3 495 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 IGKV6D-21A0A0A0MT36 114 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 NRASP01111 189 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 GGNBP1Q5YKI7 109 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 STAC2Q6ZMT1 411 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 MRPL43Q8N983 215 aaKnown RBP11.45□□□□□ -0.58
USP38-201ENST00000307017 OR1N1Q8NGS0 311 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 OPALINQ96PE5 141 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 SYT11Q9BT88 431 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 MUTYHQ9UIF7 546 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 MOKQ9UQ07 419 aa11.45□□□□□ -0.58
USP38-201ENST00000307017 ATG2BQ96BY7 2078 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 MRPS14O60783 128 aaKnown RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 KRASP01116 189 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 SBK2P0C263 348 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 HIST1H3AP68431 136 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 H1FNTQ75WM6 255 aaPredicted RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 MRPL10Q7Z7H8 261 aaKnown RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 CDC20BQ86Y33 519 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 TCTE3Q8IZS6 198 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 SLC39A11Q8N1S5 342 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ZNF680Q8NEM1 530 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ANKRD34CP0C6C1 535 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ZNF85Q03923 595 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 AGBL4Q5VU57 503 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 RNF113BQ8IZP6 322 aaKnown RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 VN1R1Q9GZP7 353 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ISYNA1Q9NPH2 558 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 CD14P08571 375 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 SELEP16581 610 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 MORN1Q5T089 497 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 RTL6Q6ICC9 239 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 DTD1Q8TEA8 209 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ZNF785A8K8V0 405 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 EIF3FO00303 357 aaPredicted RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 PATE4P0C8F1 98 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 CAMPP49913 170 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 MZT1Q08AG7 82 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ZNF429Q86V71 674 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 CBARPQ8N350 705 aaPredicted RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 RAB9BQ9NP90 201 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ETV7Q9Y603 341 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 PPM1DO15297 605 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 MPZL1O95297 269 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 METTL15P1P0C7V9 234 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 RAC1P63000 192 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 YBX1P67809 324 aaKnown RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 TMEM230Q96A57 120 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 PLA2G3Q9NZ20 509 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 ZNF391Q9UJN7 358 aa11.44□□□□□ -0.58
USP38-201ENST00000307017 STRAPQ9Y3F4 350 aaKnown RBP11.44□□□□□ -0.58
USP38-201ENST00000307017 DNAJC25-GNG10A0A024R161 153 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 K7EQM0 130 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 PSMB6P28072 239 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 AMTP48728 403 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 DEFB109BQ30KR1 87 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 SLC35E4Q6ICL7 350 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 GVQW1Q8N7I0 195 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 SDF2Q99470 211 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 S1PR3Q99500 378 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 ADAT1Q9BUB4 502 aaKnown RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 CSNK1G1Q9HCP0 422 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 PRDM7Q9NQW5 492 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 KLK4Q9Y5K2 254 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 F5H697 171 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 H0YIV9 168 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms