RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 BCL2L10Q9HD36 194 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 STEAP1Q9UHE8 339 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 KCNE3Q9Y6H6 103 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 SPAARA0A1B0GVQ0 90 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 NME2P1O60361 137 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 FCMRO60667 390 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 TCN2P20062 427 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 DPP4P27487 766 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 PKIAP61925 76 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 IL11RAQ14626 422 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 RHBDD2Q6NTF9 364 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 ZNF574Q6ZN55 896 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 ZNF679Q8IYX0 411 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 PRR22Q8IZ63 422 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 KDM8Q8N371 416 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 NKX3-1Q99801 234 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 TBL1XR1Q9BZK7 514 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 FAM117AQ9C073 453 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 OR10A5Q9H207 317 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 ZMIZ1Q9ULJ6 1067 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 C19orf53Q9UNZ5 99 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 FITM1A5D6W6 292 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 CYR61O00622 381 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 BRINP1O60477 761 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 ZGLP1P0C6A0 271 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 MAKP20794 623 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 DVL1P1P54792 670 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 GAMTQ14353 236 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 HES3Q5TGS1 186 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 GPR148Q8TDV2 347 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 MTHFD2LQ9H903 347 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 ZNF443Q9Y2A4 671 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 DCDC2BA2VCK2 349 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 F10P00742 488 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 SMIM10L1P0DMW3 83 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 CHATP28329 748 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 EFNB1P98172 346 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 PLCXD2Q0VAA5 305 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 OR1Q1Q15612 314 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 THSD4Q6ZMP0 1018 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 SYS1Q8N2H4 156 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 RFLNBQ8N5W9 214 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 BMPERQ8N8U9 685 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 SMIM10Q96HG1 83 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 C14orf144Q96I85 54 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 BCO1Q9HAY6 547 aa9.77□□□□□ -0.84
LSM3-201ENST00000306024 SIRT3Q9NTG7 399 aaPredicted RBP9.77□□□□□ -0.84
LSM3-201ENST00000306024 A0A087WV62 115 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 DBX1A6NMT0 343 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 NPIPB9F8W1W9 429 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 ALOX12BO75342 701 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 AK1P00568 194 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 SULT1A1P50225 295 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 PDX1P52945 283 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 NUBP1P53384 320 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 DUSP2Q05923 314 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 CSRP2Q16527 193 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 DUSP5Q16690 384 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 C4orf17Q53FE4 359 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 AWAT2Q6E213 333 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 LCN10Q6JVE6 187 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 POMZP3Q6PJE2 187 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 LYG2Q86SG7 212 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 ZNF610Q8N9Z0 462 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 TERB2Q8NHR7 220 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 FAM3DQ96BQ1 224 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 NELFAQ9H3P2 528 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 ST6GALNAC2Q9UJ37 374 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 GDF2Q9UK05 429 aaPredicted RBP9.77□□□□□ -0.85
LSM3-201ENST00000306024 BLOC1S5-TXNDC5H3BN57 136 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 SCDO00767 359 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 PRKNO60260 465 aaPredicted RBP9.77□□□□□ -0.85
LSM3-201ENST00000306024 STK17BO94768 372 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 SLC25A4P12235 298 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 FOXL2P58012 376 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 PPP1R1AQ13522 171 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 MEF2DQ14814 521 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 DCST2Q5T1A1 773 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 TMEM156Q8N614 296 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 OR4A4PQ8NGN8 299 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 ZNF563Q8TA94 476 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 C8orf44Q96CB5 159 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 G6PC3Q9BUM1 346 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 NRSN2Q9GZP1 204 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 BARX1Q9HBU1 254 aaPredicted RBP9.77□□□□□ -0.85
LSM3-201ENST00000306024 KCNG2Q9UJ96 466 aa9.77□□□□□ -0.85
LSM3-201ENST00000306024 SPTA1P02549 2419 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 CCDC187A0A096LP49 1063 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 RNF222A6NCQ9 220 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 MFNGO00587 321 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 ZFPL1O95159 310 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 HOXB5P09067 269 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 UBE2KP61086 200 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 BATFQ16520 125 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 ATPAF1Q5TC12 328 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 OR2T2Q6IF00 324 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms