RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 IL18BPO95998 194 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 FBP1P09467 338 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 GTF2F2P13984 249 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PRF1P14222 555 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PVRP15151 417 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 HSD11B1P28845 292 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 AGTR1P30556 359 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PRSS3P35030 304 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 GRK6P43250 576 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 NR0B1P51843 470 aaKnown RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 NXPH1P58417 271 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SLC26A5P58743 744 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SHHQ15465 462 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 TGIF1Q15583 401 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ARHGAP40Q5TG30 622 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PEAR1Q5VY43 1037 aaPredicted RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 OR10K2Q6IF99 312 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PRSS54Q6PEW0 395 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PAPD4Q6PIY7 484 aaKnown RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 TMEM17Q86X19 198 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SVBPQ8N300 66 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 C15orf54Q8N8G6 183 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 FADS6Q8N9I5 356 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 DTWD2Q8NBA8 298 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ELP5Q8TE02 316 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PTGES2Q9H7Z7 377 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 MOB1AQ9H8S9 216 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PARP11Q9NR21 331 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 TMEM235A6NFC5 223 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ZNF726A6NNF4 738 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PRKNO60260 465 aaPredicted RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 ABCD3P28288 659 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ADH6P28332 368 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SNCAP37840 140 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PBX2P40425 430 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 CFHR1Q03591 330 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 RNPS1Q15287 305 aaKnown RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 BEX5Q5H9J7 111 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SPSB3Q6PJ21 355 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 CLEC18BQ6UXF7 455 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SLC16A14Q7RTX9 510 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 TMEM200AQ86VY9 491 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ZNF227Q86WZ6 799 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 PPP1R3BQ86XI6 285 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 FRMD1Q8N878 549 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 LYZL4Q96KX0 146 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 IER2Q9BTL4 223 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ABHD6Q9BV23 337 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 NRSN2Q9GZP1 204 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 LMAN1LQ9HAT1 526 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 TCF7L1Q9HCS4 588 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SRA1Q9HD15 236 aaKnown RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 CGGBP1Q9UFW8 167 aaPredicted RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 PIAS3Q9Y6X2 628 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ZNF724A8MTY0 619 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 GRXCR1A8MXD5 290 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 BPNT1O95861 308 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ERCC1P07992 297 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 HTR2CP28335 458 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 MSX1P28360 303 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 APOBEC1P41238 236 aaKnown RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 SOX2P48431 317 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 MEP1BQ16820 701 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 GLYATL3Q5SZD4 288 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 HEPN1Q6WQI6 88 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SZRD1Q7Z422 152 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 BAP18Q8IXM2 172 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TMEM104Q8NE00 496 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 OR52N4Q8NGI2 321 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 OR52N5Q8NH56 324 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF671Q8TAW3 534 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PATE1Q8WXA2 126 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF501Q96CX3 271 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 C10orf35Q96D05 121 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SHDQ96IW2 340 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SEC22AQ96IW7 307 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 IP6K3Q96PC2 410 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 ELF4Q99607 663 aaPredicted RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 ZNF251Q9BRH9 671 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 NXF5Q9H1B4 397 aaKnown RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 PRO3102Q9H379 93 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PRR13Q9NZ81 148 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CD207Q9UJ71 328 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CSAG2Q9Y5P2 127 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TDRD6O60522 2096 aaKnown RBP4.79□□□□□ -1.64
VPS50-202ENST00000305866 CFAP47Q6ZTR5 3102 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TMEM265A0A087WTH1 108 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 LOC102723996A0A087X1L8 192 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 TCRBV21S2A2A0A5A6 115 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 OR10H2O60403 315 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 SFT2D2O95562 160 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RAB3DO95716 219 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 RENP00797 406 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 APOC1P02654 83 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 OR8U9P0C7N5 309 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PSMB6P28072 239 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 CRABP1P29762 137 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 PTGER4P35408 488 aa4.79□□□□□ -1.64
VPS50-202ENST00000305866 FAUP35544 74 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms