RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HLA-HP01893 362 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 SLC6A1P30531 599 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 TPTEP56180 551 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 SCRN3Q0VDG4 424 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 KLF9Q13886 244 aaPredicted RBP22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 PLET1Q6UQ28 207 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 ZC3HAV1LQ96H79 300 aaKnown RBP22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 LINC00470Q9BZP3 86 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 NOX3Q9HBY0 568 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 PARPBPQ9NWS1 579 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 TIMM10BQ9Y5J6 103 aa22.39■■□□□ 1.17
SDCCAG3-201ENST00000298537 MED12LQ86YW9 2145 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 MEIS3P1A6NDR6 274 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 GGT3PA6NGU5 568 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 SLC22A20A6NK97 555 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 LDLRAD4O15165 306 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 XRCC3O43542 346 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 PABPC1L2AQ5JQF8 200 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 AGAP6Q5VW22 663 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 RSBN1Q5VWQ0 802 aaPredicted RBP22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 ZMAT3Q9HA38 289 aaKnown RBP22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 PLEKHA1Q9HB21 404 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 SVILO95425 2214 aa22.38■■□□□ 1.17
SDCCAG3-201ENST00000298537 TRAV18A0A075B6X5 111 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 CACNA1GO43497 2377 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 SULT1B1O43704 296 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 CCR6P51684 374 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 FAAP20Q6NZ36 180 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 RTN4RL2Q86UN3 420 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 NKAIN3Q8N8D7 197 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 CCL2P13500 99 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 RNPS1Q15287 305 aaKnown RBP22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 PLA1AQ53H76 456 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 PAQR4Q8N4S7 273 aaPredicted RBP22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 OR5M9Q8NGP3 310 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 RNF170Q96K19 258 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 UPB1Q9UBR1 384 aa22.37■■□□□ 1.17
SDCCAG3-201ENST00000298537 MYO7BQ6PIF6 2116 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 ZNF587BE7ETH6 402 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 GABARAPH6UMI1 98 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 ACKR3P25106 362 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 AGTR1P30556 359 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 SCAND1P57086 179 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 UNC119Q13432 240 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 ZNF100Q8IYN0 542 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 GCNT2Q8N0V5 402 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 SORCS2Q96PQ0 1159 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 A0A0U1RQV5 110 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 IGHG3P01860 377 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 LCATP04180 440 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 ZNF93P35789 620 aaPredicted RBP22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 OR3A4PP47883 348 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 CRIP3Q6Q6R5 217 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 ADGRE4PQ86SQ3 457 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 PPP1R14BQ96C90 147 aa22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 METTL17Q9H7H0 456 aaPredicted RBP22.36■■□□□ 1.17
SDCCAG3-201ENST00000298537 A8MV72 311 aaPredicted RBP22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 GMDSO60547 372 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 UBE2V2Q15819 145 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 KRTAP27-1Q3LI81 207 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 B3GNT2Q9NY97 397 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 LUZP4Q9P127 313 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 PIGLQ9Y2B2 252 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 V9GYS6 101 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 ARHGAP21Q5T5U3 1957 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 WIPF3A6NGB9 483 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 DHRS3O75911 302 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 GIFP27352 417 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 TNK1Q13470 666 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 OR5D18Q8NGL1 313 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 FCAMRQ8WWV6 532 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 RNF122Q9H9V4 155 aa22.35■■□□□ 1.17
SDCCAG3-201ENST00000298537 RPL36A-HNRNPH2H7BZ11 118 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 NHLH1Q02575 133 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 PMPCAQ10713 525 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 DRAM2Q6UX65 266 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 ANGPTL5Q86XS5 388 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 ACBD4Q8NC06 268 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 CMBLQ96DG6 245 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 RBMX2Q9Y388 322 aaKnown RBP22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 TRAV6A0A075B6T7 132 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 A0A1W2PP11 408 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 FARS2O95363 451 aaKnown RBP22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 HCKP08631 526 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 VSIG8P0DPA2 414 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 TATDN3Q17R31 274 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 UTS2BQ765I0 119 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 ZNF627Q7L945 461 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 UBASH3BQ8TF42 649 aa22.34■■□□□ 1.17
SDCCAG3-201ENST00000298537 LOC100509620A0A075B734 347 aa22.33■■□□□ 1.17
SDCCAG3-201ENST00000298537 QRFPP83859 136 aa22.33■■□□□ 1.17
SDCCAG3-201ENST00000298537 REEP6Q96HR9 211 aa22.33■■□□□ 1.17
SDCCAG3-201ENST00000298537 OR10A2Q9H208 303 aa22.33■■□□□ 1.17
SDCCAG3-201ENST00000298537 GABRA1P14867 456 aa22.32■■□□□ 1.16
SDCCAG3-201ENST00000298537 MNDAP41218 407 aa22.32■■□□□ 1.16
SDCCAG3-201ENST00000298537 AWAT2Q6E213 333 aa22.32■■□□□ 1.16
SDCCAG3-201ENST00000298537 SFRP4Q6FHJ7 346 aaPredicted RBP22.32■■□□□ 1.16
SDCCAG3-201ENST00000298537 FOXRED1Q96CU9 486 aaPredicted RBP22.32■■□□□ 1.16
SDCCAG3-201ENST00000298537 TRIB1Q96RU8 372 aa22.32■■□□□ 1.16
SDCCAG3-201ENST00000298537 MARVELD1Q9BSK0 173 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms