RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ELP5Q8TE02 316 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 PAQR8Q8TEZ7 354 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 FOXRED1Q96CU9 486 aaPredicted RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 MRPS28Q9Y2Q9 187 aaKnown RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 A0A0A6YYH2 397 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 A6NJ64 397 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 FOSL2P15408 326 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 LAP3P28838 519 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 SRSF3P84103 164 aaKnown RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 ANKRD37Q7Z713 158 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 RRNAD1Q96FB5 475 aaKnown RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 LIN37Q96GY3 246 aaPredicted RBP21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 GPER1Q99527 375 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 PPP4R1LQ9P1A2 415 aa21.6■■□□□ 1.05
SPTSSA-201ENST00000298130 GPR31O00270 319 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 APOBEC1P41238 236 aaKnown RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 FAM57BQ71RH2 274 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 ST6GALNAC5Q9BVH7 336 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 TMEM231Q9H6L2 316 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 CHMP1AQ9HD42 196 aaPredicted RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 MYOZ1Q9NP98 299 aaPredicted RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 F12P00748 615 aaPredicted RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 GP1BAP07359 652 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 SLC25A4P12235 298 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 ZP4Q12836 540 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 EIF4E3Q8N5X7 224 aaKnown RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 ST8SIA1Q92185 356 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 ARHGAP5-AS1Q96IT6 56 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 CHRNA10Q9GZZ6 450 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 RAB33BQ9H082 229 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 AKIRIN1Q9H9L7 192 aaPredicted RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 SLC2A8Q9NY64 477 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 CRTAPO75718 401 aaPredicted RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 BPNT1O95861 308 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 IL2RAP01589 272 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 TMEM50BP56557 158 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 PAN3Q58A45 887 aaKnown RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 FAM122CQ6P4D5 195 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 POC1BQ8TC44 478 aa21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 RPH3AQ9Y2J0 694 aaPredicted RBP21.59■■□□□ 1.05
SPTSSA-201ENST00000298130 OR6C76A6NM76 312 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 OR2J2O76002 312 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 PHF19Q5T6S3 580 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 PRAMEF20Q5VT98 475 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 FOXRED2Q8IWF2 684 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 OR5AS1Q8N127 324 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 PTX4Q96A99 478 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 RAB3CQ96E17 227 aa21.58■■□□□ 1.05
SPTSSA-201ENST00000298130 MYO7BQ6PIF6 2116 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 MSGN1A6NI15 193 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 H0YIZ8 118 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 LPCAT3Q6P1A2 487 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 DEGS2Q6QHC5 323 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 C1QL2Q7Z5L3 287 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 UEVLDQ8IX04 471 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 OR2AJ1Q8NGZ0 328 aa21.58■■□□□ 1.04
SPTSSA-201ENST00000298130 TMEM14DPA8MWL7 114 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF41P51814 821 aaPredicted RBP21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF345Q14585 488 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 TMED6Q8WW62 240 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 FAM117AQ9C073 453 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 C5orf66Q9H5L9 145 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 METTL7AQ9H8H3 244 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 OR2S2Q9NQN1 319 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 GDF9O60383 454 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 CRHP06850 196 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF17P17021 662 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 PRSS12P56730 875 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF169Q14929 603 aaPredicted RBP21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 DTX1Q86Y01 620 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 PLPP5Q8NEB5 264 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 NFAM1Q8NET5 270 aaPredicted RBP21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 OR5AP2Q8NGF4 316 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 MRPL13Q9BYD1 178 aaKnown RBP21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 KLHL13Q9P2N7 655 aa21.57■■□□□ 1.04
SPTSSA-201ENST00000298130 PSMB6P28072 239 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 LCN10Q6JVE6 187 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 ZDHHC22Q8N966 263 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 OR4K17Q8NGC6 315 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 OR6C1Q96RD1 312 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 ARPC5LQ9BPX5 153 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 SLC39A1Q9NY26 324 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 SMAD4Q13485 552 aaKnown RBP21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 ARFRP1Q13795 201 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 GUCA2BQ16661 112 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF574Q6ZN55 896 aaPredicted RBP21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF283Q8N7M2 679 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 TMEM230Q96A57 120 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 RNF126Q9BV68 326 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 ALKBH4Q9NXW9 302 aa21.56■■□□□ 1.04
SPTSSA-201ENST00000298130 CDC14BO60729 498 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 SRSF4Q08170 494 aaKnown RBP21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 GALNTL5Q7Z4T8 443 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 ZSCAN4Q8NAM6 433 aaPredicted RBP21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 ASB13Q8WXK3 278 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 C1orf147Q96MC9 270 aaPredicted RBP21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 NKX6-2Q9C056 277 aaPredicted RBP21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 B3GALT5Q9Y2C3 310 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 DUS4LO95620 317 aaKnown RBP21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 DHPSP49366 369 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms