RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ALKBH6Q3KRA9 238 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 SMAP2Q8WU79 429 aaPredicted RBP15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 SLC25A46Q96AG3 418 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 RBMXL1Q96E39 390 aaKnown RBP15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 VSTM2LQ96N03 204 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 KCNIP2Q9NS61 270 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 FBXO34Q9NWN3 711 aa15.89■□□□□ 0.13
CDC42EP3-201ENST00000295324 ANKRD33BA6NCL7 494 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 GREM1O60565 184 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 OTPQ5XKR4 325 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 CBLN3Q6UW01 205 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 NDUFB3O43676 98 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 RPA2P15927 270 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 LRRC10Q5BKY1 277 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 SLC30A7Q8NEW0 376 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 OR13G1Q8NGZ3 307 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 OR51H1Q8NH63 302 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 CYR61O00622 381 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 CHATP28329 748 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 HTD2P86397 168 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 PRAMEF5Q5TYX0 476 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 PRAMEF6Q5VXH4 476 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 NRTNQ99748 197 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 ZNF385DQ9H6B1 395 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 SIRT3Q9NTG7 399 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 ZDBF2Q9HCK1 2354 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 PDGFBP01127 241 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 OPRM1P35372 400 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 GSK3AP49840 483 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 GNG3P63215 75 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 RTL8BQ17RB0 113 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 NUFIP2Q7Z417 695 aaKnown RBP15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 MSRB3Q8IXL7 192 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 OR2AK2Q8NG84 335 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 ZG16BQ96DA0 208 aa15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 RYDENQ9NUL5 291 aaKnown RBP15.88■□□□□ 0.13
CDC42EP3-201ENST00000295324 ASPDHA6ND91 283 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 IAH1Q2TAA2 248 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 SLC22A18ASQ8N1D0 253 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 EDARADDQ8WWZ3 215 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 AGPAT2O15120 278 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 FAHP16930 419 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 SOWAHCQ53LP3 525 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 Q8IYB0 196 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 OR2Z1Q8NG97 314 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 ZNF501Q96CX3 271 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 ST3GAL6Q9Y274 331 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 PMS2P2O95744 297 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 SPSB1Q96BD6 273 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 TRAPPC4Q9Y296 219 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 TCRBP04435 133 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 ATF1P18846 271 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 OMGP23515 440 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 SORDQ00796 357 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 FJX1Q86VR8 437 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 ZNF638Q14966 1978 aaKnown RBP15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 LYZL6O75951 148 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 CASP3P42574 277 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 SLC37A1P57057 533 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 PLA2G7Q13093 441 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 NRARPQ7Z6K4 114 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 GPR32P1Q8NGA4 272 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 ADAT1Q9BUB4 502 aaKnown RBP15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 PLA2G12AQ9BZM1 189 aa15.87■□□□□ 0.13
CDC42EP3-201ENST00000295324 DBPQ10586 325 aaPredicted RBP15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 OSR2Q8N2R0 312 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 MCHR2Q969V1 340 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 DAZAP1Q96EP5 407 aaKnown RBP15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 SF3B5Q9BWJ5 86 aaKnown RBP15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 DOCK5Q9H7D0 1870 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 WDR1O75083 606 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 CD3EP07766 207 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 GNB3P16520 340 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 SAP25Q8TEE9 199 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 DDA1Q9BW61 102 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 SLC23A1Q9UHI7 598 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 LRP12Q9Y561 859 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 C1QAP02745 245 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 ZNF32P17041 273 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 MAGEA5P43359 124 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 PSG6Q00889 435 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 DEGS2Q6QHC5 323 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 STAC2Q6ZMT1 411 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 UBE3DQ7Z6J8 389 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 SERTAD4Q9NUC0 356 aa15.86■□□□□ 0.13
CDC42EP3-201ENST00000295324 TRGV10A0A0A0MS01 117 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 IFITM5A6NNB3 132 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 TPBGQ13641 420 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 HFEQ30201 348 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 PABPC1L2AQ5JQF8 200 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 MRPS24Q96EL2 167 aaKnown RBP15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 TRMT61AQ96FX7 289 aaKnown RBP15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 RAB33BQ9H082 229 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 MYOZ1Q9NP98 299 aaPredicted RBP15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 A0A0D9SG52 128 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 A0A1W2PR80 420 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 TSTD3H0UI37 97 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 FMODQ06828 376 aa15.85■□□□□ 0.13
CDC42EP3-201ENST00000295324 HNF4GQ14541 408 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms