RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 TMEM178BH3BS89 294 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 XRCC2O43543 280 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 PMELP40967 661 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 ZMYND11Q15326 602 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 OR8G1Q15617 311 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 TIGD6Q17RP2 521 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 TMEM163Q8TC26 289 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 SPSB4Q96A44 273 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 RAB39BQ96DA2 213 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 REEP6Q96HR9 211 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 PLPP2O43688 288 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 APOC1P02654 83 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 BTG1P62324 171 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 AADACL4Q5VUY2 407 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 PRAMEF6Q5VXH4 476 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 MEPCEQ7L2J0 689 aaKnown RBP17.24■□□□□ 0.35
RAB28-201ENST00000288723 OR51F2Q8NH61 342 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 PGAM5Q96HS1 289 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 ADAT1Q9BUB4 502 aaKnown RBP17.24■□□□□ 0.35
RAB28-201ENST00000288723 YIPF3Q9GZM5 350 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 H2AFY2Q9P0M6 372 aaPredicted RBP17.24■□□□□ 0.35
RAB28-201ENST00000288723 COPS3Q9UNS2 423 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 LRP12Q9Y561 859 aa17.24■□□□□ 0.35
RAB28-201ENST00000288723 MXRA5Q9NR99 2828 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 PRR32B1ATL7 298 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 SRD5A1P18405 259 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 RAD23AP54725 363 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 FAM3AP98173 230 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 MPPED2Q15777 294 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 FAM201AQ5SY85 155 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 LCN1P1Q5VSP4 162 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 KRT77Q7Z794 578 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 RBM4BQ9BQ04 359 aaKnown RBP17.23■□□□□ 0.35
RAB28-201ENST00000288723 UFSP2Q9NUQ7 469 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 ENOPH1Q9UHY7 261 aa17.23■□□□□ 0.35
RAB28-201ENST00000288723 FBN1P35555 2871 aaKnown RBP17.22■□□□□ 0.35
RAB28-201ENST00000288723 HOXA4Q00056 320 aaPredicted RBP17.22■□□□□ 0.35
RAB28-201ENST00000288723 NXNL2Q5VZ03 156 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 ZFP1Q6P2D0 407 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 LRRC28Q86X40 367 aaPredicted RBP17.22■□□□□ 0.35
RAB28-201ENST00000288723 RFLNBQ8N5W9 214 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 OR52H1Q8NGJ2 320 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 GABARAPL3Q9BY60 117 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 OR10A2Q9H208 303 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 SP140LQ9H930 580 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 MRPL15Q9P015 296 aaKnown RBP17.22■□□□□ 0.35
RAB28-201ENST00000288723 PCDHB10Q9UN67 800 aa17.22■□□□□ 0.35
RAB28-201ENST00000288723 EI24O14681 340 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 ANPEPP15144 967 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 HNF1AP20823 631 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 CD200P41217 278 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 FAHD2BQ6P2I3 314 aaPredicted RBP17.21■□□□□ 0.35
RAB28-201ENST00000288723 FAHD2AQ96GK7 314 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 CNN2Q99439 309 aaKnown RBP17.21■□□□□ 0.35
RAB28-201ENST00000288723 OPA3Q9H6K4 179 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 PPP1R3EQ9H7J1 279 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 hCG_38984A0A1B0GV85 526 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 GMDSO60547 372 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 LCN2P80188 198 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 SLC22A4Q9H015 551 aa17.21■□□□□ 0.35
RAB28-201ENST00000288723 ATRQ13535 2644 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 MAGEB4O15481 346 aaPredicted RBP17.2■□□□□ 0.34
RAB28-201ENST00000288723 IFNA2P01563 188 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 ALPLP05186 524 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 GATA4P43694 442 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 GSK3AP49840 483 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 SEC61A1P61619 476 aaKnown RBP17.2■□□□□ 0.34
RAB28-201ENST00000288723 KLHL36Q8N4N3 616 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 CELF2-AS1Q8N7Q2 184 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 C19orf18Q8NEA5 215 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 ADGRL4Q9HBW9 690 aa17.2■□□□□ 0.34
RAB28-201ENST00000288723 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.2■□□□□ 0.34
RAB28-201ENST00000288723 TRAV20A0A0B4J274 112 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 SLC22A31A6NKX4 558 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 IFNL4K9M1U5 179 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 FAM20BO75063 409 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 ZFP36P26651 326 aaKnown RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 MDH2P40926 338 aaKnown RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 PSMA6P60900 246 aaKnown RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 ZIK1Q3SY52 487 aaPredicted RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 KCTD18Q6PI47 426 aaPredicted RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 SPICQ8N5J4 248 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 OR8B12Q8NGG6 310 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 UBE2FQ969M7 185 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 LYZL4Q96KX0 146 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 RAB3IPQ96QF0 476 aaPredicted RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 PATZ1Q9HBE1 687 aaKnown RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 TMEM165Q9HC07 324 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 S100A14Q9HCY8 104 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 LRRC30A6NM36 301 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 ANKRD30BLA7E2S9 258 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 GRPP07492 148 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 SRP14P37108 136 aaKnown RBP17.19■□□□□ 0.34
RAB28-201ENST00000288723 DDOSTP39656 456 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 TMEM155Q4W5P6 130 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 SLC35F2Q8IXU6 374 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 CBR4Q8N4T8 237 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 OR51G2Q8NGK0 314 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 OR8B4Q96RC9 309 aa17.19■□□□□ 0.34
RAB28-201ENST00000288723 MDFIQ99750 246 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms