RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SLC10A1Q14973 349 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 OR5AP2Q8NGF4 316 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 GNPNAT1Q96EK6 184 aaPredicted RBP14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 LAT2Q9GZY6 243 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 UQCC1Q9NVA1 299 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 MMP24Q9Y5R2 645 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 R4GMQ9 66 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 TTC3P53804 2025 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 NKAIN1Q4KMZ8 207 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF626Q68DY1 528 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 PLXDC2Q6UX71 529 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 OR5AS1Q8N127 324 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 OR11H7Q8NGC8 314 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 OR52N5Q8NH56 324 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 RXFP4Q8TDU9 374 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 RDH5Q92781 318 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 LANCL2Q9NS86 450 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 MLF1P58340 268 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 GUK1Q16774 197 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 FAM174AQ8TBP5 190 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 LINC01553A4QN01 128 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 M0R135 149 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 SELENOPP49908 381 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 YBX1P67809 324 aaKnown RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 OR2B11Q5JQS5 317 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 DCAF12Q5T6F0 453 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 OR4C5Q8NGB2 326 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 CA5BP1Q8WTZ4 195 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 RPUSD4Q96CM3 377 aaKnown RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF799Q96GE5 643 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 C2orf50Q96LR7 162 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 TINAGL1Q9GZM7 467 aaPredicted RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 PBOV1Q9GZY1 135 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF586Q9NXT0 402 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 SPAG17Q6Q759 2223 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 OR8U8P0C7N1 319 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 FABP6P51161 128 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF85Q03923 595 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 EXD3Q8N9H8 876 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 REEP6Q96HR9 211 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 PCDHGA9Q9Y5G4 932 aaKnown RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 TRIM61Q5EBN2 209 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 C8orf82Q6P1X6 216 aaPredicted RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 H2BFWTQ7Z2G1 175 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 YRDCQ86U90 279 aaKnown RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 LINC00469Q8N7U9 141 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 MIXL1Q9H2W2 232 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 TXNIPQ9H3M7 391 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 E5RGE8 158 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 NCMAPQ5T1S8 102 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 DND1Q8IYX4 353 aaKnown RBP14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 PPP1R3CQ9UQK1 317 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 NSG2Q9Y328 171 aa14.88□□□□□ -0.03
SH3RF1-201ENST00000284637 IDSB3KWA1 339 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 LIMS3P0CW19 117 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 LIMS4P0CW20 117 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 RAE1P78406 368 aaKnown RBP14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 PHYHD1Q5SRE7 291 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 RPS19BP1Q86WX3 136 aaKnown RBP14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 SPINT2O43291 252 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 KLHDC1Q8N7A1 406 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 SLC35G3Q8N808 338 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 MEGF10Q96KG7 1140 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 RSRP1Q9BUV0 290 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 SEC11CQ9BY50 192 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 MOB1AQ9H8S9 216 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 TBXA2RP21731 343 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 GABRA4P48169 554 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 OR2A2Q6IF42 318 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 CHAC2Q8WUX2 184 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 LHX4Q969G2 390 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 INTS12Q96CB8 462 aaKnown RBP14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 ABHD1Q96SE0 405 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 S1PR5Q9H228 398 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 DDX60LQ5H9U9 1706 aaKnown RBP14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 A0A0A6YYD5 115 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 TBPP20226 339 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 RPL29P47914 159 aaKnown RBP14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 THEM4Q5T1C6 240 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 THNSL2Q86YJ6 484 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 GPR32P1Q8NGA4 272 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 OR4F5Q8NH21 305 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 OR4F4Q96R69 305 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 FAM96BQ9Y3D0 163 aa14.87□□□□□ -0.03
SH3RF1-201ENST00000284637 F6UZH7 168 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 PPP2CBP62714 309 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 PPP2CAP67775 309 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 ENDOGQ14249 297 aaKnown RBP14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 Q6ZNB5 142 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 MUC20Q8N307 709 aaPredicted RBP14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 C8orf44Q96CB5 159 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 B9D1Q9UPM9 204 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 ELOA3CA0A087WX78 387 aaPredicted RBP14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 AQP7O14520 342 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 METTL15P1P0C7V9 234 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 PIGPP57054 158 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 CD81P60033 236 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 CDK5Q00535 292 aa14.86□□□□□ -0.03
SH3RF1-201ENST00000284637 NHLRC1Q6VVB1 395 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms