RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SLC25A46Q96AG3 418 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ZG16BQ96DA0 208 aa2.57□□□□□ -2
HERC4-201ENST00000277817 Q96M85 177 aa2.57□□□□□ -2
HERC4-201ENST00000277817 MS4A10Q96PG2 267 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CLCC1Q96S66 551 aa2.57□□□□□ -2
HERC4-201ENST00000277817 LMF2Q9BU23 707 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 MFFQ9GZY8 342 aa2.57□□□□□ -2
HERC4-201ENST00000277817 GABARAPL1Q9H0R8 117 aa2.57□□□□□ -2
HERC4-201ENST00000277817 RBM38Q9H0Z9 239 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 NT5DC2Q9H857 520 aa2.57□□□□□ -2
HERC4-201ENST00000277817 UCK1Q9HA47 277 aa2.57□□□□□ -2
HERC4-201ENST00000277817 HINT3Q9NQE9 182 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 FBXO8Q9NRD0 319 aa2.57□□□□□ -2
HERC4-201ENST00000277817 MUTYHQ9UIF7 546 aa2.57□□□□□ -2
HERC4-201ENST00000277817 NEU3Q9UQ49 428 aa2.57□□□□□ -2
HERC4-201ENST00000277817 RHBDD3Q9Y3P4 386 aa2.57□□□□□ -2
HERC4-201ENST00000277817 A3GALT2U3KPV4 340 aa2.57□□□□□ -2
HERC4-201ENST00000277817 NINQ8N4C6 2090 aa2.57□□□□□ -2
HERC4-201ENST00000277817 SPG11Q96JI7 2443 aa2.56□□□□□ -2
HERC4-201ENST00000277817 F5H5P2 479 aa2.56□□□□□ -2
HERC4-201ENST00000277817 H7C2Y5 167 aa2.56□□□□□ -2
HERC4-201ENST00000277817 GAPDHSO14556 408 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 HYAL3O43820 417 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 CTNSO60931 367 aa2.56□□□□□ -2
HERC4-201ENST00000277817 APOC1P02654 83 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TCRBP04435 133 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ZNF806P0C7X5 589 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ELK1P19419 428 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PSMB1P20618 241 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 GNRHRP30968 328 aa2.56□□□□□ -2
HERC4-201ENST00000277817 HOXA9P31269 272 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PTGER4P35408 488 aa2.56□□□□□ -2
HERC4-201ENST00000277817 HAAOP46952 286 aa2.56□□□□□ -2
HERC4-201ENST00000277817 KCNJ3P48549 501 aa2.56□□□□□ -2
HERC4-201ENST00000277817 HSD11B2P80365 405 aa2.56□□□□□ -2
HERC4-201ENST00000277817 MRPS21P82921 87 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 FABP5Q01469 135 aa2.56□□□□□ -2
HERC4-201ENST00000277817 FGL1Q08830 312 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ALKBH1Q13686 389 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 FCN2Q15485 313 aa2.56□□□□□ -2
HERC4-201ENST00000277817 EFNB3Q15768 340 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SLC22A6Q4U2R8 563 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SLC25A53Q5H9E4 307 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OTPQ5XKR4 325 aa2.56□□□□□ -2
HERC4-201ENST00000277817 GSG1LQ6UXU4 331 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ZNF704Q6ZNC4 412 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 NDUFAF7Q7L592 441 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SSX6Q7RTT6 188 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ABHD12BQ7Z5M8 362 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 MARCH3Q86UD3 253 aa2.56□□□□□ -2
HERC4-201ENST00000277817 LACC1Q8IV20 430 aa2.56□□□□□ -2
HERC4-201ENST00000277817 C10orf111Q8N326 155 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TMEM99Q8N816 258 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ACBD4Q8NC06 268 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR51D1Q8NGF3 324 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR4C15Q8NGM1 316 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OR14L1PQ8NHC6 308 aa2.56□□□□□ -2
HERC4-201ENST00000277817 LGALS14Q8TCE9 139 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PIGCQ92535 297 aa2.56□□□□□ -2
HERC4-201ENST00000277817 UCN3Q969E3 161 aa2.56□□□□□ -2
HERC4-201ENST00000277817 MCHR2Q969V1 340 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SEC22AQ96IW7 307 aa2.56□□□□□ -2
HERC4-201ENST00000277817 BMFQ96LC9 184 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SGK494Q96LW2 274 aa2.56□□□□□ -2
HERC4-201ENST00000277817 GPR137Q96N19 417 aa2.56□□□□□ -2
HERC4-201ENST00000277817 OPALINQ96PE5 141 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PRR25Q96S07 402 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TSNAXQ99598 290 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 CDX2Q99626 313 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 TPPP3Q9BW30 176 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NXF5Q9H1B4 397 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 OR10A2Q9H208 303 aa2.56□□□□□ -2
HERC4-201ENST00000277817 C6orf106Q9H6K1 298 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 ZNF442Q9H7R0 627 aa2.56□□□□□ -2
HERC4-201ENST00000277817 GPR173Q9NS66 373 aa2.56□□□□□ -2
HERC4-201ENST00000277817 HHLA2Q9UM44 414 aa2.56□□□□□ -2
HERC4-201ENST00000277817 FOXJ3Q9UPW0 622 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SLC7A11Q9UPY5 501 aa2.56□□□□□ -2
HERC4-201ENST00000277817 ANK2Q01484 3957 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SETXQ7Z333 2677 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 GPR179Q6PRD1 2367 aa2.56□□□□□ -2
HERC4-201ENST00000277817 EP300Q09472 2414 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 TRBV5-7A0A0A0MS05 114 aa2.56□□□□□ -2
HERC4-201ENST00000277817 IGHV3-20A0A0C4DH32 117 aa2.56□□□□□ -2
HERC4-201ENST00000277817 TRABD2BA6NFA1 517 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NAP1L6A6NFF2 107 aa2.56□□□□□ -2
HERC4-201ENST00000277817 WNT9BO14905 357 aa2.56□□□□□ -2
HERC4-201ENST00000277817 NBR2O15453 112 aa2.56□□□□□ -2
HERC4-201ENST00000277817 YKT6O15498 198 aa2.56□□□□□ -2
HERC4-201ENST00000277817 HCRTR1O43613 425 aa2.56□□□□□ -2
HERC4-201ENST00000277817 CLN5O75503 358 aa2.56□□□□□ -2
HERC4-201ENST00000277817 RAD51DO75771 328 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SNAPC5O75971 98 aa2.56□□□□□ -2
HERC4-201ENST00000277817 UTS2O95399 124 aa2.56□□□□□ -2
HERC4-201ENST00000277817 SBK2P0C263 348 aa2.56□□□□□ -2
HERC4-201ENST00000277817 AKAIN1P0CW23 69 aa2.56□□□□□ -2
HERC4-201ENST00000277817 PIPP12273 146 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 HIST1H1CP16403 213 aaKnown RBP2.56□□□□□ -2
HERC4-201ENST00000277817 PVALBP20472 110 aaPredicted RBP2.56□□□□□ -2
HERC4-201ENST00000277817 RBMS1P29558 406 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms