RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 SLC25A53Q5H9E4 307 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 THEM4Q5T1C6 240 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 TMEM81Q6P7N7 255 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 WDR74Q6RFH5 385 aaPredicted RBP11.46□□□□□ -0.58
C9orf3-201ENST00000277198 SPACA3Q8IXA5 215 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 PXT1Q8NFP0 134 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 OR1M1Q8NGA1 313 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF501Q96CX3 271 aaPredicted RBP11.46□□□□□ -0.58
C9orf3-201ENST00000277198 PHB2Q99623 299 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 B3GNT4Q9C0J1 378 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 STRADBQ9C0K7 418 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 OCIAD1Q9NX40 245 aa11.46□□□□□ -0.58
C9orf3-201ENST00000277198 FARSAQ9Y285 508 aaKnown RBP11.46□□□□□ -0.58
C9orf3-201ENST00000277198 NOP16Q9Y3C1 178 aaKnown RBP11.46□□□□□ -0.58
C9orf3-201ENST00000277198 LIPT2A6NK58 231 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 C9orf172C9J069 976 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 P2RY10O00398 339 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 TOX3O15405 576 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-201ENST00000277198 BCL2L11O43521 198 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 SYT7O43581 403 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 SPDEFO95238 335 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 TTRP02766 147 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 RLN2P04090 185 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 JMJD7P0C870 316 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF28P17035 718 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 RAB3AP20336 220 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 POU3F1Q03052 451 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-201ENST00000277198 CDNFQ49AH0 187 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 SCGB2B2Q4G0G5 96 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 PRAMEF17Q5VTA0 474 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 JMJD6Q6NYC1 403 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-201ENST00000277198 ACOT7LQ6ZUV0 252 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 MOB3CQ70IA8 216 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 OR2W3Q7Z3T1 314 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 FJX1Q86VR8 437 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 STPG2Q8N412 459 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 PAQR4Q8N4S7 273 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-201ENST00000277198 FGGYQ96C11 551 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 SLAMF6Q96DU3 332 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 MRGPRX4Q96LA9 322 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 FBXL2Q9UKC9 423 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 CPAMD8Q8IZJ3 1885 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 TAS2R31P59538 309 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 FMODQ06828 376 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 PXDC1Q5TGL8 231 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 RHBDD2Q6NTF9 364 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 TMEM71Q6P5X7 295 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 CORO6Q6QEF8 472 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 IGF2-ASQ6U949 168 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 TRAPPC6BQ86SZ2 158 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 LINC00346Q8IVM7 164 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 KDM8Q8N371 416 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 APCDD1LQ8NCL9 501 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 C11orf40Q8WZ69 217 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 ARL5BQ96KC2 179 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 PDCD10Q9BUL8 212 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 MRPL13Q9BYD1 178 aaKnown RBP11.45□□□□□ -0.58
C9orf3-201ENST00000277198 PBOV1Q9GZY1 135 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 ZNF768Q9H5H4 540 aaKnown RBP11.45□□□□□ -0.58
C9orf3-201ENST00000277198 FGF21Q9NSA1 209 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 CENPMQ9NSP4 180 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 LHX6Q9UPM6 363 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 VSIG4Q9Y279 399 aa11.45□□□□□ -0.58
C9orf3-201ENST00000277198 ADAMTS20P59510 1910 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 IGLV3-32A0A0A0MS00 114 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 C9orf170A2RU37 121 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 POM121CA8CG34 1229 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 STK17BO94768 372 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 IL11P20809 199 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 LAP3P28838 519 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 UNC119Q13432 240 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 SQSTM1Q13501 440 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 ACTBL2Q562R1 376 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 OR10K2Q6IF99 312 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 LANCL3Q6ZV70 420 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 PRSS58Q8IYP2 241 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-201ENST00000277198 ACBD4Q8NC06 268 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 NFAM1Q8NET5 270 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-201ENST00000277198 ELP5Q8TE02 316 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 ST8SIA4Q92187 359 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 C5orf34Q96MH7 638 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 C1QTNF6Q9BXI9 259 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 ZMAT3Q9HA38 289 aaKnown RBP11.44□□□□□ -0.58
C9orf3-201ENST00000277198 SERINC1Q9NRX5 453 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 CTSFQ9UBX1 484 aa11.44□□□□□ -0.58
C9orf3-201ENST00000277198 TMEM14DPA8MWL7 114 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 KLK10O43240 276 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 DUS4LO95620 317 aaKnown RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 FCER2P06734 321 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 GSTP1P09211 210 aaKnown RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 GNALP38405 381 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 STARP49675 285 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 IL13RA1P78552 427 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 CLN3Q13286 438 aa11.43□□□□□ -0.58
C9orf3-201ENST00000277198 EIF3IQ13347 325 aaKnown RBP11.43□□□□□ -0.58
C9orf3-201ENST00000277198 C1orf189Q5VU69 101 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms