RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TMEM88Q6PEY1 159 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 MAMDC2Q7Z304 686 aaPredicted RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CATSPERDQ86XM0 798 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 OR51A4Q8NGJ6 313 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 OR6N2Q8NGY6 317 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 SMCO4Q9NRQ5 59 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 LPAR3Q9UBY5 353 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 RAB22AQ9UL26 194 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CHD6Q8TD26 2715 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 SYNDIG1LA6NDD5 238 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ELOA3DA6NLF2 546 aaPredicted RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 K7ENP7 123 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 M0QYG6 137 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 GNB5O14775 395 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 FADS1O60427 444 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ISG15P05161 165 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 MAOAP21397 527 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 NPBWR1P48145 328 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ARHGDIBP52566 201 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 PDZK1IP1Q13113 114 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 PPP1R1AQ13522 171 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 FAM53BQ14153 422 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 PEA15Q15121 130 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ELOA3BQ3SY89 546 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 RNASE10Q5GAN6 216 aaKnown RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF614Q8N883 585 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ELOA3Q8NG57 546 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ADAMTS17Q8TE56 1095 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CT55Q8WUE5 264 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 NUDCD2Q8WVJ2 157 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ASB5Q8WWX0 329 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 RERGQ96A58 199 aaPredicted RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 MRGPRFQ96AM1 343 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF285Q96NJ3 590 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 AQP10Q96PS8 301 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 TSPAN32Q96QS1 320 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 OR5B2Q96R09 309 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CST11Q9H112 138 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 CHMP1AQ9HD42 196 aaPredicted RBP9.19□□□□□ -0.94
UPF3B-201ENST00000276201 Q9N2J8 555 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 GRHPRQ9UBQ7 328 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 DHDHQ9UQ10 334 aa9.19□□□□□ -0.94
UPF3B-201ENST00000276201 A0A1B0GTH9 108 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 C5orf52A6NGY3 159 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF860A6NHJ4 632 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 OR6C76A6NM76 312 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 H0YGG7 62 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 MFNGO00587 321 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 TAAR5O14804 337 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 EIF3GO75821 320 aaKnown RBP eCLIP9.18□□□□□ -0.94
UPF3B-201ENST00000276201 CD5P06127 495 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 GALNSP34059 522 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 ARF3P61204 181 aaPredicted RBP9.18□□□□□ -0.94
UPF3B-201ENST00000276201 AIMP2Q13155 320 aaKnown RBP9.18□□□□□ -0.94
UPF3B-201ENST00000276201 PLEKHN1Q494U1 663 aaPredicted RBP9.18□□□□□ -0.94
UPF3B-201ENST00000276201 EIF5AL1Q6IS14 154 aaKnown RBP9.18□□□□□ -0.94
UPF3B-201ENST00000276201 LCN10Q6JVE6 187 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 SLC18B1Q6NT16 456 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 NPSR1Q6W5P4 371 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 NUDT9Q9BW91 350 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 ADAM19Q9H013 955 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 SEC61A2Q9H9S3 476 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 ELOVL3Q9HB03 270 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 IL17BQ9UHF5 180 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 PADI1Q9ULC6 663 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 WIF1Q9Y5W5 379 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 FER1L5A0AVI2 2057 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 NBEAQ8NFP9 2946 aa9.18□□□□□ -0.94
UPF3B-201ENST00000276201 METTL21EPA6NDL7 271 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 MEIS3P1A6NDR6 274 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 FAM171A2A8MVW0 826 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 DCTN6O00399 190 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 SRSF10O75494 262 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 PTAFRP25105 342 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 IL13RA1P78552 427 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 HABP2Q14520 560 aaPredicted RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 CDNFQ49AH0 187 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 TMEM244Q5VVB8 128 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF385CQ66K41 422 aaPredicted RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 PRSS54Q6PEW0 395 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 KCTD18Q6PI47 426 aaPredicted RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 DPY19L4Q7Z388 723 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 ADAMTS18Q8TE60 1221 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 C8orf44Q96CB5 159 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 TSSK2Q96PF2 358 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 LPAR4Q99677 370 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 RAB18Q9NP72 206 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 STARD5Q9NSY2 213 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 METTL1Q9UBP6 276 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 MRPS2Q9Y399 296 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 MRPS18BQ9Y676 258 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 MGAQ8IWI9 3026 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 IGHMP01871 453 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 ADAM8P78325 824 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 RPL18Q07020 188 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 ACTBL2Q562R1 376 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms