RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OR4M2Q8NGB6 313 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 OTOSQ8NHW6 89 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 SGK3Q96BR1 496 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 ADAT1Q9BUB4 502 aaKnown RBP12.09□□□□□ -0.47
HMGN3-201ENST00000275036 TOR3AQ9H497 397 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 PAPOLBQ9NRJ5 636 aaKnown RBP12.09□□□□□ -0.47
HMGN3-201ENST00000275036 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 KIF17Q9P2E2 1029 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 PCDHB10Q9UN67 800 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 TBX1O43435 398 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 XRCC2O43543 280 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 FAM20BO75063 409 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 ATP5HO75947 161 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 ANXA2P07355 339 aaKnown RBP12.08□□□□□ -0.48
HMGN3-201ENST00000275036 WNT2P09544 360 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 EPHA1P21709 976 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 HSD11B1P28845 292 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 EPHA2P29317 976 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 NAA10P41227 235 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-201ENST00000275036 RASSF2P50749 326 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 HCCSP53701 268 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-201ENST00000275036 FAM3AP98173 230 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 OR8G1Q15617 311 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 FAM57BQ71RH2 274 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 SLC16A9Q7RTY1 509 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 PARP8Q8N3A8 854 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 C19orf18Q8NEA5 215 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 Q8TCH9 128 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 DUS3LQ96G46 650 aaKnown RBP12.08□□□□□ -0.48
HMGN3-201ENST00000275036 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 PPP1R3EQ9H7J1 279 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 TVP23BQ9NYZ1 205 aa12.08□□□□□ -0.48
HMGN3-201ENST00000275036 MRPL15Q9P015 296 aaKnown RBP12.08□□□□□ -0.48
HMGN3-201ENST00000275036 POLR3KQ9Y2Y1 108 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-201ENST00000275036 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 CCDC182A6NF36 153 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 A8MXK9 166 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 J3QLI3 93 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 M0R129 80 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PRKYO43930 277 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 GMDSO60547 372 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 FOXH1O75593 365 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
HMGN3-201ENST00000275036 LYNP07948 512 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 RPS7P62081 194 aaKnown RBP12.07□□□□□ -0.48
HMGN3-201ENST00000275036 APOFQ13790 326 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PTGES3Q15185 160 aaKnown RBP12.07□□□□□ -0.48
HMGN3-201ENST00000275036 SNAPC1Q16533 368 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 SLC35D3Q5M8T2 416 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 LRRN1Q6UXK5 716 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
HMGN3-201ENST00000275036 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 THEM6Q8WUY1 208 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 LRTOMTQ8WZ04 291 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 REEP6Q96HR9 211 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 PLEKHA8Q96JA3 519 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
HMGN3-201ENST00000275036 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 BRD7Q9NPI1 651 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 AP4S1Q9Y587 144 aa12.07□□□□□ -0.48
HMGN3-201ENST00000275036 hCG_38984A0A1B0GV85 526 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 LRRC30A6NM36 301 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 PRR32B1ATL7 298 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 G3V2T6 193 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 H2BFMP0C1H6 154 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 ALOX5APP20292 161 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 GATA3P23771 443 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 FASP25445 335 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 PAX2Q02962 417 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 TIGD6Q17RP2 521 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 KDM4DQ6B0I6 523 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 ASRGL1Q7L266 308 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 BCDIN3DQ7Z5W3 292 aaKnown RBP12.06□□□□□ -0.48
HMGN3-201ENST00000275036 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 KLBQ86Z14 1044 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 ERGIC1Q969X5 290 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 TEAD3Q99594 435 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 SLC6A7Q99884 636 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 OPA3Q9H6K4 179 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
HMGN3-201ENST00000275036 FSTL3O95633 263 aa12.05□□□□□ -0.48
HMGN3-201ENST00000275036 APOC1P02654 83 aa12.05□□□□□ -0.48
HMGN3-201ENST00000275036 MRPL3P09001 348 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms