RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 LAP3P28838 519 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 EGR3Q06889 387 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 FAM53BQ14153 422 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 SP6Q3SY56 376 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 FIP1L1Q6UN15 594 aaKnown RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 PLK3Q9H4B4 646 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ZFP64Q9NPA5 681 aa10.41□□□□□ -0.74
VPS33A-201ENST00000267199 ZNF230Q9UIE0 474 aaPredicted RBP10.41□□□□□ -0.74
VPS33A-201ENST00000267199 CAPZBP47756 277 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 TAF9Q16594 264 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 PRICKLE4Q2TBC4 344 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 DCAF12L2Q5VW00 463 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 MRPL21Q7Z2W9 205 aaKnown RBP10.4□□□□□ -0.74
VPS33A-201ENST00000267199 OR6K3Q8NGY3 331 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 GPR119Q8TDV5 335 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 OR6C1Q96RD1 312 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 PLEKHA3Q9HB20 300 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 DNAJB12Q9NXW2 375 aaKnown RBP10.4□□□□□ -0.74
VPS33A-201ENST00000267199 MIOXQ9UGB7 285 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 CHRNA9Q9UGM1 479 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 LY86O95711 162 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 WNT11O96014 354 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 TBXA2RP21731 343 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 CD27P26842 260 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 NKX2-1P43699 371 aaPredicted RBP10.4□□□□□ -0.74
VPS33A-201ENST00000267199 CXCL12P48061 93 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 MLF1P58340 268 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 RAB32Q13637 225 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 GUK1Q16774 197 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 SPRED2Q7Z698 418 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 LAT2Q9GZY6 243 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 GPR84Q9NQS5 396 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 CTSFQ9UBX1 484 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 LOC105371267A0A1B0GV96 52 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 A0A1B0GX78 115 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 hCG_1809904A0A1W2PP81 198 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 A0A1W2PR64 198 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 A0A1W2PRV1 198 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 PRSS37A4D1T9 235 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 ARPC3O15145 178 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 G0S2P27469 103 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 CDKN2AP42771 156 aaKnown RBP10.4□□□□□ -0.74
VPS33A-201ENST00000267199 PPP1CAP62136 330 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 HTD2P86397 168 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM128Q5BJH2 165 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 RTL6Q6ICC9 239 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 LFNGQ8NES3 379 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 OR10AC1Q8NH08 325 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 OR52N5Q8NH56 324 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 HGDQ93099 445 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.74
VPS33A-201ENST00000267199 KCNJ15Q99712 375 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 ACAD8Q9UKU7 415 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 FLVCR1Q9Y5Y0 555 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 RLFQ13129 1914 aa10.4□□□□□ -0.74
VPS33A-201ENST00000267199 TMEM272A0A1B0GTI8 110 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 SLC25A30Q5SVS4 291 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 ATPAF1Q5TC12 328 aaPredicted RBP10.4□□□□□ -0.75
VPS33A-201ENST00000267199 AADACL3Q5VUY0 350 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 MITD1Q8WV92 249 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 SEH1LQ96EE3 360 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF845Q96IR2 970 aaPredicted RBP10.4□□□□□ -0.75
VPS33A-201ENST00000267199 MMP26Q9NRE1 261 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 C19orf12Q9NSK7 152 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 B9D1Q9UPM9 204 aa10.4□□□□□ -0.75
VPS33A-201ENST00000267199 EML2O95834 649 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 RAC2P15153 192 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 HTR5AP47898 357 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 GUCA2BQ16661 112 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 OR51H1Q8NH63 302 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 C4orf45Q96LM5 186 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 NUDT9Q9BW91 350 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF236Q9UL36 1845 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 TNS1Q9HBL0 1735 aaKnown RBP10.39□□□□□ -0.75
VPS33A-201ENST00000267199 GJE1A6NN92 205 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 FABP4P15090 132 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 IL10RAQ13651 578 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 RPL7L1Q6DKI1 246 aaKnown RBP10.39□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF100Q8IYN0 542 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 ZSCAN4Q8NAM6 433 aaPredicted RBP10.39□□□□□ -0.75
VPS33A-201ENST00000267199 OR51A2Q8NGJ7 313 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 MMP25Q9NPA2 562 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 KCNIP1Q9NZI2 227 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 B4GALT7Q9UBV7 327 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 PIGLQ9Y2B2 252 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 SPTY2D1-AS1A0A0U1RR47 76 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 QDPRP09417 244 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 CD79AP11912 226 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 HSF1Q00613 529 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 IL34Q6ZMJ4 242 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 ZAR1Q86SH2 424 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 MKXQ8IYA7 352 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 RFLNBQ8N5W9 214 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 OR11G2Q8NGC1 345 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 CMTM3Q96MX0 182 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms