RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 Q499Y3 187 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 AKR1C8PQ5T2L2 129 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 TIPARPQ7Z3E1 657 aaKnown RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 TMEM229BQ8NBD8 167 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 BEND2Q8NDZ0 799 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 OR2T27Q8NH04 317 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 SFXN5Q8TD22 340 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 CCDC74AQ96AQ1 378 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 FAM3DQ96BQ1 224 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 WDR34Q96EX3 536 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 OR52A5Q9H2C5 316 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 PRSS16Q9NQE7 514 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 ZNF443Q9Y2A4 671 aaPredicted RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 CIDEAO60543 219 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 UPK3AO75631 287 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 SCAF4O95104 1147 aaKnown RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 HOXB2P14652 356 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 P2RY2P41231 377 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 AADACL3Q5VUY0 350 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 ZNF227Q86WZ6 799 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 C17orf78Q8N4C9 275 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 MARCH1Q8TCQ1 289 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 GLYATL1Q969I3 302 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 RAB39BQ96DA2 213 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 EFCAB11Q9BUY7 163 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 SH3BGRL3Q9H299 93 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 MYOZ1Q9NP98 299 aaPredicted RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 CGGBP1Q9UFW8 167 aaPredicted RBP7.84□□□□□ -1.15
VAPB-201ENST00000265619 RAB22AQ9UL26 194 aa7.84□□□□□ -1.15
VAPB-201ENST00000265619 DUS4LO95620 317 aaKnown RBP7.84□□□□□ -1.16
VAPB-201ENST00000265619 LMO1P25800 156 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 TAS2R38P59533 333 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 S100A10P60903 97 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 ACTA2P62736 377 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 ACTG2P63267 376 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 OR1Q1Q15612 314 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 ZNF684Q5T5D7 378 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 ERN2Q76MJ5 926 aaKnown RBP7.84□□□□□ -1.16
VAPB-201ENST00000265619 KLHDC8AQ8IYD2 350 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 RLN3Q8WXF3 142 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 CDS1Q92903 461 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 NKD1Q969G9 470 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 ERGIC1Q969X5 290 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 RASD2Q96D21 266 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 LMLNQ96KR4 655 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 ZNF385AQ96PM9 386 aaKnown RBP7.84□□□□□ -1.16
VAPB-201ENST00000265619 STACQ99469 402 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 FAAP24Q9BTP7 215 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 SGPP1Q9BX95 441 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 LGR4Q9BXB1 951 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 CHST11Q9NPF2 352 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 CLEC1BQ9P126 229 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 MRM2Q9UI43 246 aaKnown RBP7.84□□□□□ -1.16
VAPB-201ENST00000265619 IER3IP1Q9Y5U9 82 aa7.84□□□□□ -1.16
VAPB-201ENST00000265619 MUC3AQ02505 3323 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 SNRNP200O75643 2136 aaKnown RBP7.83□□□□□ -1.16
VAPB-201ENST00000265619 MPDZO75970 2070 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 ZNF432O94892 652 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 CSTBP04080 98 aaKnown RBP7.83□□□□□ -1.16
VAPB-201ENST00000265619 HKR1P10072 659 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 RAB4AP20338 218 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 MSX1P28360 303 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 DMWDQ09019 674 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 TMEM35AQ53FP2 167 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 C1orf185Q5T7R7 199 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 MED25Q71SY5 747 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 ZNF101Q8IZC7 436 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 MS4A8Q9BY19 250 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 GSKIPQ9P0R6 139 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 HSF4Q9ULV5 492 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 OR4C45A6NMZ5 311 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 H0Y8X5 98 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 TCF21O43680 179 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 CYB5AP00167 134 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 FCARP24071 287 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 TFPI2P48307 235 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 AFF3P51826 1226 aaKnown RBP7.83□□□□□ -1.16
VAPB-201ENST00000265619 ANKRD55Q3KP44 614 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 FCRL6Q6DN72 434 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 OR56B2PQ8NGI1 322 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 OR2I1PQ8NGU4 316 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 OR5AK2Q8NH90 309 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 AQP10Q96PS8 301 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 S100A13Q99584 98 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 ADAM19Q9H013 955 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 OR51B6Q9H340 312 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 NELFAQ9H3P2 528 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 SRMSQ9H3Y6 488 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 FBXL17Q9UF56 701 aa7.83□□□□□ -1.16
VAPB-201ENST00000265619 CHTOPQ9Y3Y2 248 aaKnown RBP7.83□□□□□ -1.16
VAPB-201ENST00000265619 GPRIN2O60269 458 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 SRPX2O60687 465 aaPredicted RBP7.82□□□□□ -1.16
VAPB-201ENST00000265619 PIAS2O75928 621 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 STK17BO94768 372 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 SPARCP09486 303 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 FGF7P21781 194 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 HRH1P35367 487 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 CST6Q15828 149 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 PRSS8Q16651 343 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 PRAMEF14Q5SWL7 426 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms