RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 C17orf78Q8N4C9 275 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 OR51A2Q8NGJ7 313 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 DKKL1Q9UK85 242 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 HSPB6O14558 160 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 SFT2D2O95562 160 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 RCC1P18754 421 aaPredicted RBP13.58□□□□□ -0.24
CASC3-201ENST00000264645 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
CASC3-201ENST00000264645 JMJD6Q6NYC1 403 aaPredicted RBP13.58□□□□□ -0.24
CASC3-201ENST00000264645 LRRC18Q8N456 261 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 BCORP1Q8N888 145 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 FAM210BQ96KR6 192 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 LRP12Q9Y561 859 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 R4GMQ9 66 aa13.58□□□□□ -0.24
CASC3-201ENST00000264645 A0A1B0GV90 55 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 OR2M5A3KFT3 312 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 OR4C45A6NMZ5 311 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 HTD2P86397 168 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 AGBL4Q5VU57 503 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 RAET1LQ5VY80 246 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 ZNF595Q8IYB9 648 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 BATF2Q8N1L9 274 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 ADAD2Q8NCV1 583 aaKnown RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 ALX4Q9H161 411 aaPredicted RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 LYRM4Q9HD34 91 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 METTL12A8MUP2 240 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 SSSCA1O60232 199 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 MPGP29372 298 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 SCAND1P57086 179 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 GPM6BQ13491 265 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 SLC25A42Q86VD7 318 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 C16orf52Q8NHV5 167 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 FAM174AQ8TBP5 190 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 GPR119Q8TDV5 335 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 GPX8Q8TED1 209 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 SNX22Q96L94 193 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 DHCR7Q9UBM7 475 aaKnown RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 DICER1Q9UPY3 1922 aaKnown RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 A8MVM7 634 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 POLR2HP52434 150 aaKnown RBP13.57□□□□□ -0.24
CASC3-201ENST00000264645 SLC37A1P57057 533 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 NR0B2Q15466 257 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 NPEPL1Q8NDH3 523 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 FGF13Q92913 245 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 GPR84Q9NQS5 396 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 MED29Q9NX70 200 aa13.57□□□□□ -0.24
CASC3-201ENST00000264645 PIN1P1O15428 100 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 TRAPPC6AO75865 159 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 HLA-HP01893 362 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 RBP2P50120 134 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 MOGAT2Q3SYC2 334 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 TMEM52BQ4KMG9 183 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 COL13A1Q5TAT6 717 aaPredicted RBP13.56□□□□□ -0.24
CASC3-201ENST00000264645 TMEM268Q5VZI3 342 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 CLEC18BQ6UXF7 455 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 KTI12Q96EK9 354 aaPredicted RBP13.56□□□□□ -0.24
CASC3-201ENST00000264645 SMIM7Q9BQ49 75 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 TEX101Q9BY14 249 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 FLRT3Q9NZU0 649 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 SCN4AP35499 1836 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 ATG2BQ96BY7 2078 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 H3BP45 60 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 ICOSLGO75144 302 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 SLC25A4P12235 298 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 GABREP78334 506 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 ZNF485Q8NCK3 441 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 OR51F2Q8NH61 342 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 NECAP2Q9NVZ3 263 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
CASC3-201ENST00000264645 TIMP1P01033 207 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 GSTP1P09211 210 aaKnown RBP13.56□□□□□ -0.24
CASC3-201ENST00000264645 TMEM31Q5JXX7 168 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 NKAIN2Q5VXU1 208 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 NSUN5P2Q63ZY6 315 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 PIGCQ92535 297 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 NINJ1Q92982 152 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 GNPNAT1Q96EK6 184 aaPredicted RBP13.56□□□□□ -0.24
CASC3-201ENST00000264645 PACRGQ96M98 296 aaPredicted RBP13.56□□□□□ -0.24
CASC3-201ENST00000264645 ZCCHC4Q9H5U6 513 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 KIR3DX1Q9H7L2 352 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 DNAJB11Q9UBS4 358 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 VSIG4Q9Y279 399 aa13.56□□□□□ -0.24
CASC3-201ENST00000264645 A0A1W2PPV4 95 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 SULT2B1O00204 365 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 NTSR1P30989 418 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 BTG2P78543 158 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 NPSR1Q6W5P4 371 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 PATE1Q8WXA2 126 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 THOC3Q96J01 351 aaKnown RBP13.55□□□□□ -0.24
CASC3-201ENST00000264645 LCORQ96JN0 433 aaPredicted RBP13.55□□□□□ -0.24
CASC3-201ENST00000264645 CCDC187A0A096LP49 1063 aa13.55□□□□□ -0.24
CASC3-201ENST00000264645 MMP7P09237 267 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms