RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 GUSBP11Q6P575 273 aa20.08■□□□□ 0.8
MCF2L-201ENST00000261963 TMEM205Q6UW68 189 aa20.08■□□□□ 0.8
MCF2L-201ENST00000261963 OR4A4PQ8NGN8 299 aa20.08■□□□□ 0.8
MCF2L-201ENST00000261963 INTS12Q96CB8 462 aaKnown RBP20.08■□□□□ 0.8
MCF2L-201ENST00000261963 NPIPB13A6NJU9 1138 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 NPIPB4C9JG80 1138 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 CD2P06729 351 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ZNF823P16415 610 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 PTAFRP25105 342 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 CXADRP78310 365 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ACY1Q03154 408 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 TLE3Q04726 772 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ATPAF1Q5TC12 328 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 GPX8Q8TED1 209 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ZBTB8AQ96BR9 441 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 SLC25A44Q96H78 314 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 CKLFQ9UBR5 152 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 CGGBP1Q9UFW8 167 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 LY6G6EA0A0G2JKS1 128 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 LOC101059948A0A1B0GTJ6 334 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 LOC107986453A0A1B0GWG9 222 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 A0A1W2PQM1 296 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 C1orf196B1AJZ1 125 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ETV2O00321 342 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ZNF208O43345 1280 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 AMY2AP04746 511 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 TPT1P13693 172 aaKnown RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 ARRB1P49407 418 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 PRKXP51817 358 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 GLYATL3Q5SZD4 288 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 STOML3Q8TAV4 291 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 CLDN23Q96B33 292 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 PIK3IP1Q96FE7 263 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 MIOXQ9UGB7 285 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 OR52A1Q9UKL2 312 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 PLEKHA6Q9Y2H5 1048 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 MRPS18BQ9Y676 258 aaKnown RBP20.07■□□□□ 0.8
MCF2L-201ENST00000261963 U3KQA8 63 aa20.07■□□□□ 0.8
MCF2L-201ENST00000261963 CPED1A4D0V7 1026 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 LIPT2A6NK58 231 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 SCRG1O75711 98 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 HLA-AP01891 365 aaKnown RBP20.06■□□□□ 0.8
MCF2L-201ENST00000261963 HTR2CP28335 458 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 NR0B2Q15466 257 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 DNM1P34Q6PK57 102 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 TMEM229BQ8NBD8 167 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 TCEAL7Q9BRU2 100 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 ATG5Q9H1Y0 275 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 HHLA2Q9UM44 414 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 ZNF705EA8MWA4 302 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-201ENST00000261963 H3BML4 177 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 M0QYG6 137 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 CXCL12P48061 93 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 EIF2S3LQ2VIR3 472 aaKnown RBP20.06■□□□□ 0.8
MCF2L-201ENST00000261963 CORO6Q6QEF8 472 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 IL34Q6ZMJ4 242 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 NAA40Q86UY6 237 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 DDIT4LQ96D03 193 aa20.06■□□□□ 0.8
MCF2L-201ENST00000261963 SEBOXQ9HB31 216 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-201ENST00000261963 LMX1BO60663 402 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 FARS2O95363 451 aaKnown RBP20.05■□□□□ 0.8
MCF2L-201ENST00000261963 ISG15P05161 165 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 EMP2P54851 167 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 SQSTM1Q13501 440 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 TOMM20Q15388 145 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 ZNF385CQ66K41 422 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-201ENST00000261963 OR13C3Q8NGS6 347 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 DCNP07585 359 aaKnown RBP20.05■□□□□ 0.8
MCF2L-201ENST00000261963 PTGDSP41222 190 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 PJVKQ0ZLH3 352 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 GALNT16Q8N428 558 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 C5orf34Q96MH7 638 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 ACKR4Q9NPB9 350 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 KLRF1Q9NZS2 232 aa20.05■□□□□ 0.8
MCF2L-201ENST00000261963 F8VVB4 439 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 F8VWA3 439 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 EPHA8P29322 1005 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-201ENST00000261963 CCL7P80098 99 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 SPOCK1Q08629 439 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 AIMP2Q13155 320 aaKnown RBP20.04■□□□□ 0.8
MCF2L-201ENST00000261963 GFOD2Q3B7J2 385 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 NKAPLQ5M9Q1 402 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 PTCRAQ6ISU1 281 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-201ENST00000261963 SLC30A7Q8NEW0 376 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 POC1BQ8TC44 478 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 EMC6Q9BV81 110 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 RCC2Q9P258 522 aaKnown RBP20.04■□□□□ 0.8
MCF2L-201ENST00000261963 B3GAT1Q9P2W7 334 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 TMEM269A0A1B0GVZ9 245 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 DCDC2BA2VCK2 349 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 VSTM2BA6NLU5 285 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 LCN10Q6JVE6 187 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 LYPD6Q86Y78 171 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 BAP18Q8IXM2 172 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 RNF133Q8WVZ7 376 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 NRIP2Q9BQI9 281 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 SMCO4Q9NRQ5 59 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 ALKBH4Q9NXW9 302 aa20.04■□□□□ 0.8
MCF2L-201ENST00000261963 IGHV5-10-1A0A0J9YXX1 117 aa20.03■□□□□ 0.8
MCF2L-201ENST00000261963 LDLRAD4O15165 306 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms