RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 A6NJ64 397 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 OR2F2O95006 317 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 SLC25A1P53007 311 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 RPL27P61353 136 aaKnown RBP11.55□□□□□ -0.56
SNX1-201ENST00000261889 RIPPLY1Q0D2K3 151 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 SMAD4Q13485 552 aaKnown RBP11.55□□□□□ -0.56
SNX1-201ENST00000261889 OR2F1Q13607 317 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 PLAC9Q5JTB6 97 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 ADAM5Q6NVV9 412 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 GLIPR1L1Q6UWM5 242 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 CLEC18BQ6UXF7 455 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 C1QL2Q7Z5L3 287 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 COA4Q9NYJ1 87 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 MBTPS2O43462 519 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 DIRAS3O95661 229 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 HCKP08631 526 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 THEGLP0DJG4 465 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 NQO2P16083 231 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 CHAF1BQ13112 559 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 OR52N5Q8NH56 324 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 ARL11Q969Q4 196 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 CMTM3Q96MX0 182 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 SLC25A21Q9BQT8 299 aaPredicted RBP11.54□□□□□ -0.56
SNX1-201ENST00000261889 C5orf66Q9H5L9 145 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 PRODH2Q9UF12 536 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 RHBDD3Q9Y3P4 386 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 IGLV1-36A0A0B4J1U3 117 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 A0A1W2PNR3 127 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 A0A1W2PPH5 198 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 TTLL8A6PVC2 850 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 PNMTP11086 282 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 SLC37A1P57057 533 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 ZNF260Q3ZCT1 412 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 C14orf28Q4W4Y0 310 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 PGAP1Q75T13 922 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 CATSPERDQ86XM0 798 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 CD207Q9UJ71 328 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 TMEM14AQ9Y6G1 99 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 RALGAPA1Q6GYQ0 2036 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 RER1O15258 196 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 BGLAPP02818 100 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 EGR3Q06889 387 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 MST1LQ2TV78 715 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 KIAA2026Q5HYC2 2103 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 DNM1P46Q6ZS02 220 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 SLC25A42Q86VD7 318 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 DTX1Q86Y01 620 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 TOMM40LQ969M1 308 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 TMEM230Q96A57 120 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 NECAB3Q96P71 396 aaPredicted RBP11.54□□□□□ -0.56
SNX1-201ENST00000261889 C1orf198Q9H425 327 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 CYTL1Q9NRR1 136 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 BOD1L1Q8NFC6 3051 aa11.54□□□□□ -0.56
SNX1-201ENST00000261889 LY86O95711 162 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 CD8AP01732 235 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 SERPINA2P20848 420 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 GLO1Q04760 184 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 PEA15Q15121 130 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 C1orf140Q5VVS0 124 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 HLA-DQA1Q5Y7H0 255 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 FAM166AQ6J272 317 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 MITD1Q8WV92 249 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 G6PC2Q9NQR9 355 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 SVILO95425 2214 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 IGKV1D-8A0A087WSZ0 117 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 E9PLN8 166 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 WDPCPO95876 746 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 GP1BBP13224 206 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 TPT1P13693 172 aaKnown RBP11.53□□□□□ -0.56
SNX1-201ENST00000261889 SFTPDP35247 375 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 B2MP61769 119 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 AVPI1Q5T686 147 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 KCTD18Q6PI47 426 aaPredicted RBP11.53□□□□□ -0.56
SNX1-201ENST00000261889 Q7L0L9 218 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 C9orf40Q8IXQ3 194 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 GLYATL2Q8WU03 294 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 BCL2L14Q9BZR8 327 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 IFT22Q9H7X7 185 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 UBE2ZQ9H832 354 aaPredicted RBP11.53□□□□□ -0.56
SNX1-201ENST00000261889 ZNF275Q9NSD4 429 aaPredicted RBP11.53□□□□□ -0.56
SNX1-201ENST00000261889 URGCP-MRPS24S4R325 110 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 A0A1B0GW55 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 METTL21EPA6NDL7 271 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 SHISA7A6NL88 538 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 RAMP1O60894 148 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 S100A6P06703 90 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4L2P0CJ85 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4L3P0CJ86 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4L4P0CJ87 422 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4L5P0CJ88 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4L6P0CJ89 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 DUX4L7P0CJ90 424 aa11.53□□□□□ -0.56
SNX1-201ENST00000261889 OR13C7P0DN81 318 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms