RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TFAP2AP05549 437 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 GPR12P47775 334 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 SLC35G3Q8N808 338 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 WDR1O75083 606 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 FAHP16930 419 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 TAF9Q16594 264 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 OR2AK2Q8NG84 335 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 OR2M2Q96R28 347 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 CYSLTR2Q9NS75 346 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 A0A1W2PR80 420 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 PHF1O43189 567 aaPredicted RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 CT45A8P0DMV1 189 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 CT45A9P0DMV2 189 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 MPGP29372 298 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 ZFP36L2P47974 494 aaKnown RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 LUMP51884 338 aaPredicted RBP12.45□□□□□ -0.42
CDH1-201ENST00000261769 HBG1P69891 147 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 HBG2P69892 147 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 FMODQ06828 376 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 CT45A2Q5DJT8 189 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 LSMEM1Q8N8F7 131 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 OR2AE1Q8NHA4 323 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 TTTY12Q9BZ98 90 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 NMNAT2Q9BZQ4 307 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 C20orf141Q9NUB4 165 aa12.45□□□□□ -0.42
CDH1-201ENST00000261769 LGALS8O00214 317 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 PMS2P2O95744 297 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 APEX1P27695 318 aaKnown RBP12.44□□□□□ -0.42
CDH1-201ENST00000261769 TPBGQ13641 420 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ST3GAL6Q9Y274 331 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 LRP12Q9Y561 859 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 IGHV1-45A0A0A0MS14 117 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ARPC5O15511 151 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 PTBP1P26599 531 aaKnown RBP eCLIP12.44□□□□□ -0.427e-8■■■□□ 17.6
CDH1-201ENST00000261769 HMGA2P52926 109 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 TGIF1Q15583 401 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 OR2T2Q6IF00 324 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 OSR2Q8N2R0 312 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ELMOD3Q96FG2 381 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 TRIM64CA6NLI5 447 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 AIPO00170 330 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 S100PP25815 95 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ZNF136P52737 540 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 TNFAIP6P98066 277 aaPredicted RBP12.44□□□□□ -0.42
CDH1-201ENST00000261769 ZNF774Q6NX45 483 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 TMEM179BQ7Z7N9 219 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ATG4DQ86TL0 474 aaPredicted RBP12.44□□□□□ -0.42
CDH1-201ENST00000261769 LAX1Q8IWV1 398 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 TUSC5Q8IXB3 177 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 FITM1A5D6W6 292 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ALKBH6Q3KRA9 238 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 HEPHL1Q6MZM0 1159 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 ZNF441Q8N8Z8 693 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 PLA2G12AQ9BZM1 189 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 CHRNA10Q9GZZ6 450 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 NDUFB11Q9NX14 153 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 NCOR1O75376 2440 aa12.44□□□□□ -0.42
CDH1-201ENST00000261769 A0A1B0GTH9 108 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 HRKO00198 91 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 EPPINO95925 133 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 CD79BP40259 229 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 C1orf185Q5T7R7 199 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 SDSLQ96GA7 329 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 GUCD1Q96NT3 240 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 SPACA5Q96QH8 159 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 UGT2A1Q9Y4X1 527 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 CLDN1O95832 211 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 NGFRP08138 427 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 PPP1CBP62140 327 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 C12orf73Q69YU5 71 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 LYPD4Q6UWN0 246 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 TSEN54Q7Z6J9 526 aaKnown RBP12.43□□□□□ -0.42
CDH1-201ENST00000261769 MMP28Q9H239 520 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 KCNIP2Q9NS61 270 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 AHRRA9YTQ3 701 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 RER1O15258 196 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 MAGEB4O15481 346 aaPredicted RBP12.43□□□□□ -0.42
CDH1-201ENST00000261769 TSPAN15O95858 294 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 PMP2P02689 132 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 FUCA1P04066 466 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 CLEC2LP0C7M8 214 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 AKR1C1Q04828 323 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 OR4Q3Q8NH05 313 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 C17orf50Q8WW18 174 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 SLAMF9Q96A28 289 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 BORCS7Q96B45 105 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 VWCEQ96DN2 955 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 MRPS24Q96EL2 167 aaKnown RBP12.43□□□□□ -0.42
CDH1-201ENST00000261769 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
CDH1-201ENST00000261769 TSPAN32Q96QS1 320 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 DOK1Q99704 481 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms