RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RCC2Q9P258 522 aaKnown RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 SIRT4Q9Y6E7 314 aaPredicted RBP16.81■□□□□ 0.28
COL4A3BP-201ENST00000261415 PYCARD-AS1I3L0S3 204 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 CDC42EP2O14613 210 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 ANXA2P07355 339 aaKnown RBP16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 CD79AP11912 226 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 MAKP20794 623 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 CXCR1P25024 350 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 PCP4P48539 62 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 FOXK2Q01167 660 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 GLT8D1Q68CQ7 371 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 SPACA3Q8IXA5 215 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TEAD3Q99594 435 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TUBA4BQ9H853 241 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 DEPPQ9NTK1 212 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 KIAA1549Q9HCM3 1950 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TRAV14DV4A0A0A6YYC5 116 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR5H15A6NDH6 313 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 ETV2O00321 342 aaPredicted RBP16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 EGR4Q05215 589 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 FOXF1Q12946 379 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 OR52W1Q6IF63 320 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 ARL9Q6T311 187 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMPRSS11FQ6ZWK6 438 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 IZUMO1Q8IYV9 350 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 CDK20Q8IZL9 346 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 CMTM4Q8IZR5 234 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 RHOVQ96L33 236 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF75AQ96N20 296 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 GNRHR2Q96P88 292 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 PLA2G12AQ9BZM1 189 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 WDR13Q9H1Z4 485 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TNFSF18Q9UNG2 199 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TP53TG5Q9Y2B4 290 aa16.8■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMED7-TICAM2A0A0A6YYA0 188 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 CD8AP01732 235 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 SLC25A4P12235 298 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMEM244Q5VVB8 128 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 ALG8Q9BVK2 526 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 SEC61A2Q9H9S3 476 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 KLK11Q9UBX7 282 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMED7Q9Y3B3 224 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 MGAQ8IWI9 3026 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMEM72A0PK05 275 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 FUT1P19526 365 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 CASP6P55212 293 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 C21orf62-AS1Q17RA5 79 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 ACSM3Q53FZ2 586 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 SLC25A53Q5H9E4 307 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 ALKBH2Q6NS38 261 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 ACOT7LQ6ZUV0 252 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 DPPA2Q7Z7J5 298 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 MUC20Q8N307 709 aaPredicted RBP16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 MDS2Q8NDY4 140 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 RNF141Q8WVD5 230 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 MRGPRX4Q96LA9 322 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 NRIP2Q9BQI9 281 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 NAA11Q9BSU3 229 aaPredicted RBP16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 EGLN3Q9H6Z9 239 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 ACKR4Q9NPB9 350 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMEM100Q9NV29 134 aa16.79■□□□□ 0.28
COL4A3BP-201ENST00000261415 CACNA1AO00555 2505 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 ANKRD11Q6UB99 2663 aaPredicted RBP16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 GGT3PA6NGU5 568 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 SHISA8B8ZZ34 492 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 J3QRE1 110 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 TMEM127O75204 238 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 HIST1H1BP16401 226 aaKnown RBP16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 S100A2P29034 98 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 PJVKQ0ZLH3 352 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 PYY3Q5JQD4 70 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 MALSU1Q96EH3 234 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 HES7Q9BYE0 225 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 LHX6Q9UPM6 363 aa16.78■□□□□ 0.28
COL4A3BP-201ENST00000261415 BTBD17A6NE02 478 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 ZNF705EA8MWA4 302 aaPredicted RBP16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 ACOT7O00154 380 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 CEACAM4O75871 244 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 ARL6IP5O75915 188 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 MT-ND5P03915 603 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 DDTP30046 118 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 APOBEC1P41238 236 aaKnown RBP16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 POU4F2Q12837 409 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 SSX6Q7RTT6 188 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 ANGPTL5Q86XS5 388 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 HAS2Q92819 552 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 CLCC1Q96S66 551 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 IGF2RP11717 2491 aa16.77■□□□□ 0.28
COL4A3BP-201ENST00000261415 PINLYPA6NC86 204 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 LRRC3CA6NJW4 275 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 CBR3O75828 277 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 VAMP1P23763 118 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 GLP1RP43220 463 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 DSCR4P56555 118 aaPredicted RBP16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 PKIAP61925 76 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 ARG2P78540 354 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 SRSF3P84103 164 aaKnown RBP16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 GFOD2Q3B7J2 385 aa16.77■□□□□ 0.27
COL4A3BP-201ENST00000261415 ZNF620Q6ZNG0 422 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms