RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MKRN2OSH3BPM6 223 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 M0R135 149 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 IGFBP3P17936 291 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-201ENST00000254816 RAB35Q15286 201 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 ADGRE4PQ86SQ3 457 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 EXTL1Q92935 676 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 SLC25A38Q96DW6 304 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 ADAT3Q96EY9 351 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-201ENST00000254816 ZNF799Q96GE5 643 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 FAM71F1Q96KD3 344 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-201ENST00000254816 PLSCR2Q9NRY7 297 aa16.52■□□□□ 0.24
TRIM47-201ENST00000254816 RPL36A-HNRNPH2H7BZ11 118 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 SPOCK1Q08629 439 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 SCRN3Q0VDG4 424 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 SARAFQ96BY9 339 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 OR2H1Q9GZK4 316 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 WNT5BQ9H1J7 359 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 DPAGT1Q9H3H5 408 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 ING3Q9NXR8 418 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 ZNF224Q9NZL3 707 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 CKLFQ9UBR5 152 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 FOXJ3Q9UPW0 622 aa16.52■□□□□ 0.23
TRIM47-201ENST00000254816 OTX1P32242 354 aaPredicted RBP16.51■□□□□ 0.23
TRIM47-201ENST00000254816 GNALP38405 381 aa16.51■□□□□ 0.23
TRIM47-201ENST00000254816 BTG1P62324 171 aa16.51■□□□□ 0.23
TRIM47-201ENST00000254816 HGFACQ04756 655 aa16.51■□□□□ 0.23
TRIM47-201ENST00000254816 OR1F12Q8NHA8 337 aa16.51■□□□□ 0.23
TRIM47-201ENST00000254816 OR5V1Q9UGF6 321 aa16.51■□□□□ 0.23
TRIM47-201ENST00000254816 TIMM10BQ9Y5J6 103 aa16.51■□□□□ 0.23
TRIM47-201ENST00000254816 OR6C65A6NJZ3 312 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 K7ENP7 123 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 FARS2O95363 451 aaKnown RBP16.5■□□□□ 0.23
TRIM47-201ENST00000254816 TCRBP04435 133 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 FCGR2AP12318 317 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 ABOP16442 354 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 FSTP19883 344 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 INO80CQ6PI98 192 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-201ENST00000254816 SPTSSAQ969W0 71 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 LYZL4Q96KX0 146 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 SLC17A5Q9NRA2 495 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 TP53TG5Q9Y2B4 290 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 ITGA5P08648 1049 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 MMP7P09237 267 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-201ENST00000254816 CRYGSP22914 178 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 HTR5AP47898 357 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 PLA2G7Q13093 441 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 FCN2Q15485 313 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 TBR1Q16650 682 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 NDUFA5Q16718 116 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 SNAI3Q3KNW1 292 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 HACD4Q5VWC8 232 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 GMPPAQ96IJ6 420 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-201ENST00000254816 CACNG6Q9BXT2 260 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 KCNK15Q9H427 330 aa16.5■□□□□ 0.23
TRIM47-201ENST00000254816 CGGBP1Q9UFW8 167 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-201ENST00000254816 ZNF503-AS2A6NEH8 195 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 PTHLHP12272 177 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 GDNFP39905 211 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 GZMKP49863 264 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 ZNF585AQ6P3V2 769 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 SMIM4Q8WVI0 70 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 OR6C6A6NF89 314 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 RRP8O43159 456 aaKnown RBP16.49■□□□□ 0.23
TRIM47-201ENST00000254816 DHFRP00374 187 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 HLA-HP01893 362 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 C1QBP02746 253 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 PCBD1P61457 104 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 MAB21L1Q13394 359 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 KLF9Q13886 244 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-201ENST00000254816 PABPC1L2AQ5JQF8 200 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 BAIAP2L2Q6UXY1 529 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 FGD2Q7Z6J4 655 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 PHF21AQ96BD5 680 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 STEAP1Q9UHE8 339 aa16.49■□□□□ 0.23
TRIM47-201ENST00000254816 SS18L1O75177 396 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-201ENST00000254816 SNRPD2P62316 118 aaKnown RBP16.48■□□□□ 0.23
TRIM47-201ENST00000254816 C6orf183Q5T699 404 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 C9orf106Q8NAJ2 232 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 CPEB3Q8NE35 698 aaKnown RBP16.48■□□□□ 0.23
TRIM47-201ENST00000254816 SYNPRQ8TBG9 265 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 MED28Q9H204 178 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 NUBP2Q9Y5Y2 271 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 AKR7A2O43488 359 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 GSTZ1O43708 216 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-201ENST00000254816 ERP29P30040 261 aaKnown RBP16.48■□□□□ 0.23
TRIM47-201ENST00000254816 OR51D1Q8NGF3 324 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 OR52I2Q8NH67 350 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 ZFAND1Q8TCF1 268 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 GHITMQ9H3K2 345 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 BEX1Q9HBH7 125 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 NOX3Q9HBY0 568 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 ZNF71Q9NQZ8 489 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-201ENST00000254816 RAXQ9Y2V3 346 aa16.48■□□□□ 0.23
TRIM47-201ENST00000254816 ARPC4-TTLL3A0A0A6YYG9 625 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 CALCBP10092 127 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 ZNF20P17024 532 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 CCL1P22362 96 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 OR3A2P47893 321 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 NRN1LQ496H8 165 aa16.47■□□□□ 0.23
TRIM47-201ENST00000254816 DMRTC1Q5HYR2 192 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms