RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C2CD4CQ8TF44 421 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 MARC2Q969Z3 335 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 C14orf79Q96F83 325 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 CBR3O75828 277 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 EGR3Q06889 387 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 CD276Q5ZPR3 534 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2G2Q8NGZ5 317 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 GABARAPL1Q9H0R8 117 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 PEX11BO96011 259 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 PRPH2P23942 346 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 ADAM5Q6NVV9 412 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 DBX2Q6ZNG2 339 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 FKBP2P26885 142 aaKnown RBP16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 ETV6P41212 452 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 PRDX4Q13162 271 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 CPEB3Q8NE35 698 aaKnown RBP16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 TERB2Q8NHR7 220 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 CDCA4Q9BXL8 241 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 NPAP1Q9NZP6 1156 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 FBXO4Q9UKT5 387 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 FXYD1O00168 92 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 CDC14BO60729 498 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 RAE1P78406 368 aaKnown RBP16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF85Q03923 595 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 NKG7Q16617 165 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 PLA1AQ53H76 456 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 LRFN5Q96NI6 719 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 VN1R1Q9GZP7 353 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 BCL2L10Q9HD36 194 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF354AO60765 605 aaPredicted RBP16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 TOX4O94842 621 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 MGMTP16455 207 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ECI1P42126 302 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 PIGPP57054 158 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF718Q3SXZ3 478 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 WDR88Q6ZMY6 472 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF71Q9NQZ8 489 aaPredicted RBP16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 FBXO34Q9NWN3 711 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 SLC31A2O15432 143 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 PMP22Q01453 160 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 MAMSTRQ6ZN01 415 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 OR4C3Q8NH37 302 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 MVB12AQ96EY5 273 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 PRDM7Q9NQW5 492 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 TMEM200CA6NKL6 621 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 DFFBO76075 338 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF83P51522 516 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2Z1Q8NG97 314 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 OR4F5Q8NH21 305 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ZG16BQ96DA0 208 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 OR4F4Q96R69 305 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 C20orf141Q9NUB4 165 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 QPCTLQ9NXS2 382 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 OR5H8P0DN80 308 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 FAM74A1Q5RGS3 127 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 MFSD4AQ8N468 514 aa16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 MN1Q10571 1320 aaPredicted RBP16.84■□□□□ 0.29
SMARCC1-201ENST00000254480 ATG2BQ96BY7 2078 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 DCTN6O00399 190 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 ASCL1P50553 236 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 SH2D5Q6ZV89 423 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 LSRQ86X29 649 aaPredicted RBP16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 KLHDC8BQ8IXV7 354 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 RPUSD4Q96CM3 377 aaKnown RBP16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 FAM96BQ9Y3D0 163 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 DEFB108AA8MXU0 73 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 OR7C2O60412 319 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 SUB1P53999 127 aaKnown RBP eCLIP16.83■□□□□ 0.297e-9■■■■■ 27.1
SMARCC1-201ENST00000254480 LINC01555Q8NAE3 123 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 NOXO1Q8NFA2 376 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 MOB1AQ9H8S9 216 aa16.83■□□□□ 0.29
SMARCC1-201ENST00000254480 IGHV3-13P01766 116 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 IGHV3-7P01780 117 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 RAF1P04049 648 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 CD1EP15812 388 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 GNG10P50151 68 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 RGS7BPQ6MZT1 257 aaPredicted RBP16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 TAAR9Q96RI9 348 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 PAX6P26367 422 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 ZNF117Q03924 483 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 FZD2Q14332 565 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 SPACA1Q9HBV2 294 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 ZNF391Q9UJN7 358 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 LRP12Q9Y561 859 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 DTYMKP23919 212 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 RTL8BQ17RB0 113 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 H3F3CQ6NXT2 135 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 OR4Q3Q8NH05 313 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 ST8SIA4Q92187 359 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 TXN2Q99757 166 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 FAM173AQ9BQD7 235 aa16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 ZNF230Q9UIE0 474 aaPredicted RBP16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 TNRC6CQ9HCJ0 1690 aaKnown RBP16.83■□□□□ 0.28
SMARCC1-201ENST00000254480 FAM90A27PA6NNH2 459 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 CD80P33681 288 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 RAB1AP62820 205 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 NT5CQ8TCD5 201 aa16.82■□□□□ 0.28
SMARCC1-201ENST00000254480 OR5H14A6NHG9 310 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms