RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RNF4P78317 190 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 TOMM34Q15785 309 aaPredicted RBP15.09■□□□□ 0.01
FOXA1-201ENST00000250448 SGCBQ16585 318 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 MRPL14Q6P1L8 145 aaKnown RBP15.09■□□□□ 0.01
FOXA1-201ENST00000250448 DHRS13Q6UX07 377 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 VSX1Q9NZR4 365 aaPredicted RBP15.09■□□□□ 0.01
FOXA1-201ENST00000250448 NDRG3Q9UGV2 375 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 HHLA2Q9UM44 414 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 KCNK7Q9Y2U2 307 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 CPAMD8Q8IZJ3 1885 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 LOC100509620A0A075B734 347 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 LOC107986453A0A1B0GWG9 222 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 C9orf170A2RU37 121 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 GPR31O00270 319 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 HCRTR2O43614 444 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 KLK3P07288 261 aaPredicted RBP15.09■□□□□ 0.01
FOXA1-201ENST00000250448 CELA2AP08217 269 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 C1orf100Q5SVJ3 147 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 MARCH3Q86UD3 253 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 FJX1Q86VR8 437 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 ZDHHC22Q8N966 263 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 ZNF565Q8N9K5 539 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 NFAM1Q8NET5 270 aaPredicted RBP15.09■□□□□ 0.01
FOXA1-201ENST00000250448 OR52N5Q8NH56 324 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 MITD1Q8WV92 249 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 AQP3Q92482 292 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 PTX4Q96A99 478 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 PARD6AQ9NPB6 346 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 MBD2Q9UBB5 411 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 PTRH2Q9Y3E5 179 aaKnown RBP15.09■□□□□ 0.01
FOXA1-201ENST00000250448 ASPMQ8IZT6 3477 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 TRBV11-1A0A0K0K1C0 115 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 TMEM218A2RU14 115 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 INPP5JQ15735 1006 aaPredicted RBP15.08■□□□□ 0.01
FOXA1-201ENST00000250448 CPEB2Q7Z5Q1 589 aaKnown RBP15.08■□□□□ 0.01
FOXA1-201ENST00000250448 TRAPPC6BQ86SZ2 158 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 INO80EQ8NBZ0 244 aaPredicted RBP15.08■□□□□ 0.01
FOXA1-201ENST00000250448 NKD1Q969G9 470 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 MRGPRFQ96AM1 343 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 PHB2Q99623 299 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 EDARQ9UNE0 448 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 EMC9Q9Y3B6 208 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 R4GMQ9 66 aa15.08■□□□□ 0.01
FOXA1-201ENST00000250448 C2orf72A6NCS6 295 aa15.08■□□□□ 0
FOXA1-201ENST00000250448 SRSF10O75494 262 aaKnown RBP15.08■□□□□ 0
FOXA1-201ENST00000250448 H2AFB1P0C5Y9 115 aa15.08■□□□□ 0
FOXA1-201ENST00000250448 MPZP25189 248 aa15.08■□□□□ 0
FOXA1-201ENST00000250448 PUSL1Q8N0Z8 303 aaKnown RBP15.08■□□□□ 0
FOXA1-201ENST00000250448 TXNIPQ9H3M7 391 aa15.08■□□□□ 0
FOXA1-201ENST00000250448 GDF2Q9UK05 429 aaPredicted RBP15.08■□□□□ 0
FOXA1-201ENST00000250448 TMED7Q9Y3B3 224 aa15.08■□□□□ 0
FOXA1-201ENST00000250448 LOC390937A0A1W2PQ73 354 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 WIPF3A6NGB9 483 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 MT-ATP6P00846 226 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 RAB6AP20340 208 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 RPS18P62269 152 aaKnown RBP15.07■□□□□ 0
FOXA1-201ENST00000250448 IL13RA1P78552 427 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 RAB12Q6IQ22 244 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 RAB11FIP2Q7L804 512 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 SVBPQ8N300 66 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 OR4D6Q8NGJ1 314 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 COL5A1P20908 1838 aaPredicted RBP15.07■□□□□ 0
FOXA1-201ENST00000250448 A0A1W2PNU3 283 aaPredicted RBP15.07■□□□□ 0
FOXA1-201ENST00000250448 H7C2Y5 167 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 ZNF124Q15973 351 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 SGCAQ16586 387 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 ZNF260Q3ZCT1 412 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 UNQ6126/PRO20091Q6UXV3 157 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 RHOUQ7L0Q8 258 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 NKAIN3Q8N8D7 197 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 SGK3Q96BR1 496 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 RHBDD3Q9Y3P4 386 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 LMX1BO60663 402 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 STK17BO94768 372 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 WISP1O95388 367 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 NUDT14O95848 222 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 UMODP07911 640 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 HFEQ30201 348 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 ARMC10Q8N2F6 343 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 ZNF441Q8N8Z8 693 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 CASTOR1Q8WTX7 329 aa15.07■□□□□ 0
FOXA1-201ENST00000250448 ZNF292O60281 2723 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 METTL21EPA6NDL7 271 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 FGF16O43320 207 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 TSPAN2O60636 221 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 FREM3P0C091 2139 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 ADCYAP1P18509 176 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 AKR1C2P52895 323 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 AKR1C1Q04828 323 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 GUCA2BQ16661 112 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 HAGHLQ6PII5 290 aaPredicted RBP15.06■□□□□ 0
FOXA1-201ENST00000250448 LYPD6Q86Y78 171 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 LDLRAD3Q86YD5 345 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 GVQW1Q8N7I0 195 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 FOXRED1Q96CU9 486 aaPredicted RBP15.06■□□□□ 0
FOXA1-201ENST00000250448 CMBLQ96DG6 245 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 G6PC2Q9NQR9 355 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 SDHAF3Q9NRP4 125 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 OR52A1Q9UKL2 312 aa15.06■□□□□ 0
FOXA1-201ENST00000250448 RAB22AQ9UL26 194 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms